Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01671 atggGTAGATCTCCTTGTTGTGAAAGAGAGCACACCAACAAAGGAGCTTGGTCCAAAGAGGAAGATGAACGCCTCATCAACTATATCAAGCTTCACGGCGAAGGCTGTTGGAGATCTCTTCCTAAAGCAGCTGGTTTGCTTCGATGTGGCAAGAGTTGCAGACTCAGATGGATAAACTACCTGAGACCTGATCTCAAAAGAGGAAACTTCACCGAACAAGAAGATGAGCTCATCGTTAACCTCCACGGCTTACTTGGAAACAAATGGTCTTCAATAGCCGCAAGATTACCGGGAAGGACAGATAATGAGATCAAGAACTACTGGAACACCCACATCAAACGGAAACTCTATAGCCGTGGAATAGACCCTCAAACTCATCGCCCGCTCAACGCCGCCGGTACTCCACCCACGATTAGTACCAGTACAGTTCCTCTGGATATGGTCTCTTCGAGTATTAGAAAAACCAACAACAACGATAGCATTAGcaacaataacaattttgatttaatgacGACGACTAACTTGGCTGTAACTAGTACTTATACCGATACGGCTGCTGCTGCCGGTGAAGATTCAAACTCCAACAGCGGCAGCGGCGCGGCGTTACCACAGAGGTTGAAGCCCATCCTCATCCTCATCAAATCAACCTTGAGCTCTCAATA 662 0.4532 MGRSPCCEREHTNKGAWSKEEDERLINYIKLHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEQEDELIVNLHGLLGNKWSSIAARLPGRTDNEIKNYWNTHIKRKLYSRGIDPQTHRPLNAAGTPPTISTSTVPLDMVSSSIRKTNNNDSISNNNNFDLMTTTNLAVTSTYTDTAAAAGEDSNSNSGSGAALPQRLKPILILIKSTLSSQ 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01671 220 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva06g01671 220 MobiDBLite consensus disorder prediction 123 143 - -
Bva06g01671 220 CDD SANT 69 112 IPR001005 -
Bva06g01671 220 SMART sant 66 114 IPR001005 -
Bva06g01671 220 SMART sant 13 63 IPR001005 -
Bva06g01671 220 CDD SANT 16 61 IPR001005 -
Bva06g01671 220 Gene3D - 69 116 - -
Bva06g01671 220 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bva06g01671 220 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 174 - -
Bva06g01671 220 Gene3D - 14 66 - -
Bva06g01671 220 PANTHER TRANSCRIPTION FACTOR MYB7 1 174 - -
Bva06g01671 220 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Bva06g01671 220 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Bva06g01671 220 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bva06g01671 220 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva06g01671 220 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01671 Bva-Chr6 11749327 11750639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01671 1 132 MYB Transcription Factor Family AT2G16720 85.606 2.06e-85 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva06g01671 Myb_DNA-binding 6.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01671 K09422 - gmx:100808083 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01671 06 11749327 11750639 Bva06g01671 06 11749327 11750639 ECH