Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01670 ATGGAGATGAGGGCACGATTTGtggttttcttcttgttgctttTTCTCCTTGCTTCTCaAGAGGTGATGGTTCAAACCGAGGCAAGACACTGCGAGTCGAAGAGCCACCGTTTTAAGGGGATGTGTATGAGTGACCATAACTGCGCTTCCGTTTGCCTTGTTGAAGGTTTCACCGGTGGTCACTGCCGAGGATTCCACCGACGCTGCTTTTGCAAGAAACGCTGTTG 227 0.467 MEMRARFVVFFLLLFLLASQEVMVQTEARHCESKSHRFKGMCMSDHNCASVCLVEGFTGGHCRGFHRRCFCKKRC 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01670 75 PANTHER DEFENSIN-LIKE PROTEIN 1 4 75 - -
Bva06g01670 75 Gene3D - 28 75 IPR036574 -
Bva06g01670 75 SMART gth_4 30 75 IPR003614 GO:0006952
Bva06g01670 75 CDD Knot1 42 71 IPR003614 GO:0006952
Bva06g01670 75 PANTHER DEFENSIN 4 75 - -
Bva06g01670 75 Pfam Gamma-thionin family 29 75 - -
Bva06g01670 75 SUPERFAMILY Scorpion toxin-like 29 75 IPR036574 -
Bva06g01670 75 ProSitePatterns Gamma-thionins family signature. 29 52 IPR008176 GO:0006952
Bva06g01670 75 PRINTS Purothionin signature 30 45 IPR008176 GO:0006952
Bva06g01670 75 PRINTS Purothionin signature 60 74 IPR008176 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01670 Bva-Chr6 11746545 11746862 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01670 1 75 Plant Defensins Gene Families AT2G02130 57.143 5.53e-25 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01670 - - pvu:PHAVU_009G158100g 114.39