Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01668 ATGGATAAGTACGAGGTGATGAAGGATTTGGGGTCTGGGAATTTTGGGGTGGCTAGGCTCATGAGGCACAAAGAGACCAAGGAACTCGTCGCCATGAAATACATCGATCGTGGCCACAAGATTGATGAGAATGTGGCGAGAGAGATTATAAACCACAGGTCCCTTCGACACCCCAATATAATCCGTTTCAAGGAGGTGGTTTTGACCCCCACACATTTAGCAATAGTAATGGAGTATGCAGCGGGAGGGGAGCTCTTTGAGAGGATATGCTCTGCTGGCAGATTCAGTGAAGATGAGGCTAGATACTTCTTTCAGCAGCTGATTTCTGGTGTCCATTACTGTCATGCCATGCAAATATGCCACAGAGATTTGAAGCTAGAAAATACCCTTTTAGATGGAAGTCCTGCACCTCGCTTGAAAATCTGCGACTTTGGTTATTCCAAGTCATCTTTGCTGCACTCACGACCCAAATCAACTGTTGGAACTCCTGCTTATATAGCACCAGAAGTTCTTTCTAGACGGGAGTATGATGGCAAGATGGCTGATGTGTGGTCGTGTGGAGTGACTCTCTATGTTATGCTGGTTGGAGCATATCCCTTTGAGGACCAGGATGACCCTAGGAATTTTAGGAAAACAATTCAGCGAATAATGGCTGTTCAATACAAAATACCTGATTATGTTCACATTTCTCAAGATTGCAGACACCTCCTCTCTCTCATATTTGTTGCAAGTCCAATGAGGAGAATTACTCTTAAGGAAATTAAGAACCACCCGTGGTTTTTAAAGAATCTTCCAAGGGAGCTTACTGAATCAGCTCAAGCCGTGTATTACCAGAGGGATAACCCAAGCTTTTCTGTTCAAAGTGTGGAAGAGATAATGAAAATTGTGGGAGAGGCAAGAAATCCACCCCCAGTATCTAGGCCAGTCAAAGGTTTTGGCTGGGAAggtgaagaagatgaaggggATGATGTGGATGGAGAggtggaagaagaagaggatgaagaagatgagTATGACAAAAGGGTGAGGGAGGTTCATCAGAGTGGGGAATTTCATGTCAGTTA 1064 0.4229 MDKYEVMKDLGSGNFGVARLMRHKETKELVAMKYIDRGHKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVHYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKMADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMAVQYKIPDYVHISQDCRHLLSLIFVASPMRRITLKEIKNHPWFLKNLPRELTESAQAVYYQRDNPSFSVQSVEEIMKIVGEARNPPPVSRPVKGFGWEGEEDEGDDVDGEVEEEEDEEDEYDKRVREVHQSGEFHVS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01668 354 PANTHER SERINE/THREONINE KINASE 2 347 - -
Bva06g01668 354 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01668 354 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Bva06g01668 354 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01668 354 MobiDBLite consensus disorder prediction 304 354 - -
Bva06g01668 354 MobiDBLite consensus disorder prediction 339 354 - -
Bva06g01668 354 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01668 354 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2H 2 347 - -
Bva06g01668 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Bva06g01668 354 SUPERFAMILY Protein kinase-like (PK-like) 1 294 IPR011009 -
Bva06g01668 354 Gene3D Transferase(Phosphotransferase) domain 1 80 267 - -
Bva06g01668 354 MobiDBLite consensus disorder prediction 316 338 - -
Bva06g01668 354 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Bva06g01668 354 CDD STKc_SnRK2 3 259 - -
Bva06g01668 354 Coils Coil 328 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01668 Bva-Chr6 11733217 11737944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01668 3 263 CBL-interacting serine-threonine protein kinases AT2G26980 42.279 1.37e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Bva06g01668 Pkinase 3.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01668 K14498 - gmx:547968 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01668 06 11733217 11737944 Bva06g01668 06 11733217 11737944 ECH