Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01662 ATGGCCGCAGAAATTTCTTCCAAGTCGCTACTCTTATCCATTAAAACTCAACTCCGGCACCGGCAGAAACAACACCAAGATGGACGTACTAGTATTATAAGGAGAAGAACCTGCGGATTgcaatcatcatcatcacttTCGTTTTCTATATCCAAAACTTCCTTTCCTTCTCGCTCTGAAAATGGCGCTTTCTCCAGCAACTCCCGCGACAAGAGGCTCAGTGTGTTTTGTCAGGTTGCTGGCACGAAGTTACCATCCTTATCCGACCTCGAATTTGCTGCCAAAGTTGGCCGGGATCGTCTTTCCAAGGTGCCTGTCTCTAATATCAGGAATTTCTGCATCATTGCTCATATTGACCATGGAAAATCGACCTTAGCGGATAAGTTGCTTCAAGTGACTGGCACTGTAGAGCAGCGAGAAATGAAGGATCAATTTCTCGATAACATGGAtttggagagagaaagaggcaTTACAATTAAGCTACAGGCTGCTCGAATGcgttatatatttgaaaacgAACCATATTGCTTAAATCTAATAGATACTCCAGGACACGTTGACTTCTCTTATGAGGTTTCAAGATCACTTGCTGCATGTGAAGGCGCTCTTCTTGTAGTAGATGCTTCTCAGGGAGTTGAAGCACAAACTCTCGCTAATGTTTATTTGGCCTTGGAGAACAACCTAGAAATTATCCCTgtttttaacaaaatagatCTTCCAGGTGCTGAACCAGAACGAGTTATTAAGGAGATTGAAGAGGTTGTTGGGTTAGATTGTAGCAATGCAATTCTTTGCTCTGCAAAGGAAGGTATAGGTATAACTGATATTCTCAATGCAATTGTTGCGAGAATTCCTCCACCTGCTGATACATCTGCAAGGCCATTGAGGGCCTTAATTTTTGATAGTTACTATGATCCATACAGGGGtgttattgtatattttcGAGTTGTAGATGGCTCTATAAAGAAAGGTGACAGAGTTTATTTTATGGCTAGTGGGAAGGATTATTTTGCTGATGAAATTGGAGTTTTGTCTCCCAATCAACAACAAGTTGAAGAATTGTATGCGGGAGAGGTGGGCTATCTTTCAGCATCTATAAGAACAGTAGCTGATGCCAGAGTCGGTGACACCATTACTCACTATGGAAGAAAGGCGGAGAACTCACTCCCTGGATATGAAGAAGCCACTCCCATGGTGTTCTGTGGCCTATTTCCTGTTGATGCAGACCAGTTTCCTGAACTGCGTGATGCACTTGAGAAGCTACAGCTTAATGATGCTGCACTGAAGTTTGAACCTGAGACCTCAAATGCCATGGGATTTGGCTTTAGATGCGGGTTTCTGGGTCTTCTCCATATGGAAATTGTTCAGGAAAGACTTGAGAGAGAATACGACCTGAGTCTGATAACTACTGCTCCAAGTGTCGTTTACAGAGTGAACTGTGTAAATGGTGATATTGTTGAATGCTCAAATCCATCTGTACTCCCTGAACCTGGAAAAAGGAGGTCCATAGAGGAACCATTTGTTAAGATTGAGATGCTTACACCAAAGGACTACATAGGTCCGCTTATGGAACTGGCTCAAGATAGAAGAGGGATCTTCAAAGAGATGAAATATATTACTGAAAATAGAGCATCAATCACCTATGAATTACCACTAGCAGAAATGGTTGGTGATTTCTTTGACCAGTTAAAGTCAAGAAGTAAAGGTTATGCTAGCATGGAGTATACTTTTTTCGGGTACCAAGAAAGTGATTTAGTTAGACTTGACATACAGATAAATGGCGATCCAGTGGAACCATTGGCTACAATTGTTCACAAAGATAAGGCATATTCAGTGGGTAGGGCTTTGACTCAAAAGTTGAAGGAGCTTATTCCCCGGCAAATGTTTAAAGTGCCCATTCAAGCCTGCATAGGTTCAAAAGTAATTGCTAGTGAAGCTTTATCCGCAATAAGGAAGGATGTATTAGCCAAATGCTACGGCGGGGACAtttcaagaaagaagaagtTGCTTAAGAAACAGgctgaaggaaagaaaaggatgaaGGCAATTGGTAAAATTGACGTACCTCAAGAAGCCTTCATGGCTGTTCTGAAATTAGAGAAGGAGGTGATGACTGATGATAGAGCGATTAGGCAAATGTCAACCAAGGCTTTGGACGCAAAGGAAGTGGCCAGGGCTGCCATAAACTGTATTGGCTTAGGATACGATGTCGCCAGCGATCTTAGACTCAAATCCTGTAAAAGGTTTTCTTTTGACTCGAGATTAATTGCTATTGACAACGATAGTGTTCGTACTATTGAGCTCCCTGGAGGTATTTCAATCCAAAATGTCCCCAAATCCATCAAATGCGATAAAGGGGAGCGCTTGAGGTTATGCTCCGATGTCCTCTCTTTCCAGCAGATGTCAGAGCAGTTCAACCGGGAACTATCGCTCTCTGGCAAAATTCCGACTGGTAAATTCAATGCTGCATTTGAGTATACAGGAGTTTGGCAGAAAGATGCTGCAAATACAAAATCCCTTGCTTTTGACGGTGTCTCCATTACACTTTACAACATCGCATTGGAGAAAACACATATAGGTCTTCGTGATTTTGTCAAACAAGCTGTACCATCGGTGTGGGATCCGGCTGCATTGGCTAGGTTCATTGAGAAGTATGGCACCCATGTTATAGTTGGGGTGAAAATAGGGGGAACTGATATAATCTATGCAAAGCAGCAATTTTCATCTATTCTCCAATCTGCTGATGTacagaaaaaattgaaggaccTAGCAGACGAACTCTTTATAGATGCAGCTAGAAGGAATAATGCAAATAATGGAAAATttaatgagaaagaaaagcTTATGAGGGAGAATGGACTTATCATGAACATTCCTTCCAGTTCCTACTCCCATATGGAGGTGCAGGATATCAAGTTCCTGTTCAAGAGGAAAGGTGGGAATGGGAAAAATCATCTGACCCATAATGAGTGGTGCCGAACCGTCCTATCTCAACCTGATGTGATCTCAATGTCATTCATACCAATTACATCTTTACTTAGTGGAATTAATGGGAGTGGATTTTTGACCCATGCCATAAATCTCTATCTTCGATATAAACCTCCAGTTGAAGAACTACATCAGTTTTTGGACTTTCAGCTTCCAAGGCAATGGGCCCCTGTATTTGGTGAGCTTGCACTTGGTCCTGAAAGGAAGGCACAAAATAGTGCATCTTTGCAGTTCAGTTTCATGGGACCTAAGCTTTATGTCAACACAACACTGGTTGATGTGGGCAAGCGGCCTGTAACGGGCCTTCGATTGTATttagaaggaaagaaaagcaattgCTTGGCAATCCACTTGCAACACCTTTCCTCACTGCCCAAGTCCTTCCAACTTGAGGATGAGAAGAATGGGAGTGCACCAATTGGCTCCTCTGAACGCAGTTACTATGAGAAGGTCCAATGGAAGAGTTTCTCTCATGTATGCACAGCTCCCGTTGAATCTGTTGAGGACGACATTGTTGTGACGGGCGCTCACTTCGAAGTTGGAGATGCTGGTCTAAAGAAAGTTTTATTCTTAAGACTTCATTTCTCTAAAGTTGTTGGTGCAACACGCCTGAAATCACCTGAATGGGATGATTCTCCTGGCTCTACGCAGAAATCTGGAATAATCTCAACCATAATTAGCACTCATTTCTCGACTCCTCAAAAACCCGCTCCACGCCCATCTGATGTGAACGTTAACTCTGCTTTATACCCTGGAGGACCCCCTGTGCCCACGCAGTCACCTAAACTCTTAAGATTTGTTGACACAACAGAGATGACAAGGGGACCACAGGTCTTCCCTGGCTACTGGGTTGTGTCTGGAGCAAGGCTTTTAGTGGAGAAGGGGAAAATATCGCTTAAAGTCAAGTATTCTCTTTTAGCTACATGTTTACCTGATGAAGATATGCCAAGTTATTG 3944 0.4102 MAAEISSKSLLLSIKTQLRHRQKQHQDGRTSIIRRRTCGLQSSSSLSFSISKTSFPSRSENGAFSSNSRDKRLSVFCQVAGTKLPSLSDLEFAAKVGRDRLSKVPVSNIRNFCIIAHIDHGKSTLADKLLQVTGTVEQREMKDQFLDNMDLERERGITIKLQAARMRYIFENEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVFNKIDLPGAEPERVIKEIEEVVGLDCSNAILCSAKEGIGITDILNAIVARIPPPADTSARPLRALIFDSYYDPYRGVIVYFRVVDGSIKKGDRVYFMASGKDYFADEIGVLSPNQQQVEELYAGEVGYLSASIRTVADARVGDTITHYGRKAENSLPGYEEATPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSNAMGFGFRCGFLGLLHMEIVQERLEREYDLSLITTAPSVVYRVNCVNGDIVECSNPSVLPEPGKRRSIEEPFVKIEMLTPKDYIGPLMELAQDRRGIFKEMKYITENRASITYELPLAEMVGDFFDQLKSRSKGYASMEYTFFGYQESDLVRLDIQINGDPVEPLATIVHKDKAYSVGRALTQKLKELIPRQMFKVPIQACIGSKVIASEALSAIRKDVLAKCYGGDISRKKKLLKKQAEGKKRMKAIGKIDVPQEAFMAVLKLEKEVMTDDRAIRQMSTKALDAKEVARAAINCIGLGYDVASDLRLKSCKRFSFDSRLIAIDNDSVRTIELPGGISIQNVPKSIKCDKGERLRLCSDVLSFQQMSEQFNRELSLSGKIPTGKFNAAFEYTGVWQKDAANTKSLAFDGVSITLYNIALEKTHIGLRDFVKQAVPSVWDPAALARFIEKYGTHVIVGVKIGGTDIIYAKQQFSSILQSADVQKKLKDLADELFIDAARRNNANNGKFNEKEKLMRENGLIMNIPSSSYSHMEVQDIKFLFKRKGGNGKNHLTHNEWCRTVLSQPDVISMSFIPITSLLSGINGSGFLTHAINLYLRYKPPVEELHQFLDFQLPRQWAPVFGELALGPERKAQNSASLQFSFMGPKLYVNTTLVDVGKRPVTGLRLYLEGKKSNCLAIHLQHLSSLPKSFQLEDEKNGSAPIGSSERSYYEKVQWKSFSHVCTAPVESVEDDIVVTGAHFEVGDAGLKKVLFLRLHFSKVVGATRLKSPEWDDSPGSTQKSGIISTIISTHFSTPQKPAPRPSDVNVNSALYPGGPPVPTQSPKLLRFVDTTEMTRGPQVFPGYWVVSGARLLVEKGKISLKVKYSLLATCLPDEDMPSY 1314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01662 1314 SUPERFAMILY EF-G C-terminal domain-like 503 598 IPR035647 -
Bva06g01662 1314 Pfam Elongation factor Tu GTP binding domain 108 285 IPR000795 GO:0003924|GO:0005525
Bva06g01662 1314 TIGRFAM lepA: elongation factor 4 108 699 IPR006297 GO:0005525
Bva06g01662 1314 Gene3D Elongation Factor G (Translational Gtpase), domain 3 390 471 - -
Bva06g01662 1314 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 107 288 IPR000795 GO:0003924|GO:0005525
Bva06g01662 1314 SUPERFAMILY Translation proteins 269 391 IPR009000 -
Bva06g01662 1314 Pfam MAC/Perforin domain 819 1029 IPR020864 -
Bva06g01662 1314 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 714 1043 IPR020864 -
Bva06g01662 1314 Gene3D Translation factors 291 389 - -
Bva06g01662 1314 Pfam GTP-binding protein LepA C-terminus 592 698 IPR013842 -
Bva06g01662 1314 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 147 162 IPR031157 -
Bva06g01662 1314 Hamap Elongation factor 4 [lepA]. 104 702 IPR006297 GO:0005525
Bva06g01662 1314 Pfam Elongation factor Tu domain 2 309 379 IPR004161 GO:0005525
Bva06g01662 1314 Pfam Elongation factor G C-terminus 503 589 IPR000640 -
Bva06g01662 1314 Gene3D - 584 658 IPR038363 -
Bva06g01662 1314 CDD LepA 110 287 - -
Bva06g01662 1314 SMART EFG_C_a 502 590 IPR000640 -
Bva06g01662 1314 CDD lepA_C 505 584 IPR035654 -
Bva06g01662 1314 SMART MACPF_8 837 1031 IPR020864 -
Bva06g01662 1314 Gene3D - 472 583 - -
Bva06g01662 1314 PANTHER TRANSLATION FACTOR GUF1-RELATED 97 698 IPR006297 GO:0005525
Bva06g01662 1314 PANTHER TRANSLATION FACTOR GUF1, MITOCHONDRIAL 97 698 - -
Bva06g01662 1314 Gene3D - 106 289 IPR027417 -
Bva06g01662 1314 CDD EF4_II 295 380 - -
Bva06g01662 1314 CDD EF4_III 397 472 - -
Bva06g01662 1314 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 305 IPR027417 -
Bva06g01662 1314 SUPERFAMILY EF-G C-terminal domain-like 396 474 IPR035647 -
Bva06g01662 1314 TIGRFAM small_GTP: small GTP-binding protein domain 110 279 IPR005225 GO:0005525
Bva06g01662 1314 Hamap Translation factor GUF1 homolog, organellar chromatophore [lepA]. 101 701 IPR027518 -
Bva06g01662 1314 PRINTS GTP-binding elongation factor signature 154 162 IPR000795 GO:0003924|GO:0005525
Bva06g01662 1314 PRINTS GTP-binding elongation factor signature 178 188 IPR000795 GO:0003924|GO:0005525
Bva06g01662 1314 PRINTS GTP-binding elongation factor signature 111 124 IPR000795 GO:0003924|GO:0005525
Bva06g01662 1314 PRINTS GTP-binding elongation factor signature 230 239 IPR000795 GO:0003924|GO:0005525
Bva06g01662 1314 PRINTS GTP-binding elongation factor signature 194 205 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01662 Bva-Chr6 11696310 11710375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01662 109 319 Eukaryotic Initiation Factors Gene Family AT3G22980 36.161 6.51e-26 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01662 K21594 - gmx:100784073 1145.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01662 06 11696310 11710375 Bva06g01662 06 11696310 11710375 ECH