Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01655 ATGGCTGCTGCTACTTTACCTCCAGCATACCAGGCATGGACGAGCTTGGCGGTGCCCGATTGGCTGAACAAAGGAGACAACGCATGGCAAATGACCTCAGCTACCCTGGTGGGCATACAAAGCATGCCTGGCCTTGTGATTCTCTACGGTAGCATTGTGAAGAAGAAATGGGCCGTCAACTCTGCTTTCATGGCTCTCTACGCATTCGCCGCCGTTATTATTTGCTGGGTTACGTGGGCTTACAAGATGTCCTTCGGGGAgaagcttttacccttctgggGAAAAGCCGGTCCTGCTCTTGGTCAGAAGTTTCTCATCAATCAAGCTGCACTCCCAGCCTCCGCGCACTTTCACAAAAACGGTGAGCTCGAGACCAGTGAGATCGAGCCCTATTATCCCATGGCCACTATGGTGTGGTTTCAGTGTGTTTTCGCTGCAATTGCGCTGGTTATCTTGGCGGGTTCGGTGCTGGCGAGGATGAATTTCAAGGCATGGATGATGTTTGTGCCTCTGTGGCTTACCTTTTCTTACACGGTGGGTGCTTTCAGCTTGTGGGGTGGTGGCTTCTTGTTCCATTGGGGTGTCATGGACTACTCCGGTGGTTATGTCATTCATCTTTCTTCTGGAATTGCTGGCTTCACTGCTGCTTATTGGGTTGGACCAAGGCCGACGAAGGACAGGGAGAGATTTCCCCCAAACAACGTGCTGCTAACGTTGGCAGGTGCTGGGCTACTATGGCTGGGATGGGCTGGTTTCAATGGAGGAGATCCATACGCAGCTAACATAGACTCGTCCATAGCAGTGCTCAACACCAACATCTGCGCTGCCACCAGTCTCCTTGTGTGGACCTGGCTCgatgttattttcttcaagaaaCCTTCTGTCATCGGAGCAGTACAGGGCATGATCACTGGTCTTGTTTGCATTACTCCCGGTGCCGGTCTTGTTCAAGGATGGGCGGCCATAGTGATGGGAGTTCTATCGGGAAGTGTGCCATGGTTCTCGATGATGGTGTTGGGGAAGAAGTTGAAAGTGTTCCAAATGGTGGATGACACTCTGGCAGTGTTTCACACTCATGCAGTGGCAGGGCTTCTCGGCGGCTTACTTACCGGCCTCTTCGCGGAGCCTAGACTAAGCGGATTGTTCCTGGCGGTGACCAACTCCAGAGGTGGCGTCTATGGAGGCTCCGGCGGAATCCAAATCCTCAAACAAATAGTGGGAGGCTTATTCATTATTGGATGGAACCTGGTGGTTACTTCAATTATTTGTGTAGTGATCAATTTCATCGTTCCGCTGAGAATGTCAGAGGAAGAGTTGCTGATTGGGGATGATGCAGTCCATGGTGAAGAAGCTTACGCCCTATGGGGTGATGGCGAGAAGTTGAGCATCTACTCCGACGATACCACCCGCCACGGCATTGCTTCAAGCGGTGCCACTCAGGTCGTGTG 1448 0.509 MAAATLPPAYQAWTSLAVPDWLNKGDNAWQMTSATLVGIQSMPGLVILYGSIVKKKWAVNSAFMALYAFAAVIICWVTWAYKMSFGEKLLPFWGKAGPALGQKFLINQAALPASAHFHKNGELETSEIEPYYPMATMVWFQCVFAAIALVILAGSVLARMNFKAWMMFVPLWLTFSYTVGAFSLWGGGFLFHWGVMDYSGGYVIHLSSGIAGFTAAYWVGPRPTKDRERFPPNNVLLTLAGAGLLWLGWAGFNGGDPYAANIDSSIAVLNTNICAATSLLVWTWLDVIFFKKPSVIGAVQGMITGLVCITPGAGLVQGWAAIVMGVLSGSVPWFSMMVLGKKLKVFQMVDDTLAVFHTHAVAGLLGGLLTGLFAEPRLSGLFLAVTNSRGGVYGGSGGIQILKQIVGGLFIIGWNLVVTSIICVVINFIVPLRMSEEELLIGDDAVHGEEAYALWGDGEKLSIYSDDTTRHGIASSGATQVV 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01655 482 PRINTS Rhesus blood group protein signature 267 289 IPR002229 GO:0005887
Bva06g01655 482 PRINTS Rhesus blood group protein signature 236 254 IPR002229 GO:0005887
Bva06g01655 482 PRINTS Rhesus blood group protein signature 141 157 IPR002229 GO:0005887
Bva06g01655 482 PRINTS Rhesus blood group protein signature 322 340 IPR002229 GO:0005887
Bva06g01655 482 ProSitePatterns Ammonium transporters signature. 197 222 IPR018047 GO:0008519|GO:0016020|GO:0072488
Bva06g01655 482 Gene3D Ammonium transporter AmtB like domains 6 455 IPR029020 -
Bva06g01655 482 TIGRFAM amt: ammonium transporter 26 452 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bva06g01655 482 PANTHER AMMONIUM TRANSPORTER 14 475 - -
Bva06g01655 482 SUPERFAMILY Ammonium transporter 21 434 - -
Bva06g01655 482 Pfam Ammonium Transporter Family 28 452 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bva06g01655 482 PANTHER AMMONIUM TRANSPORTER MEP2 14 475 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01655 Bva-Chr6 11648049 11650835 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01655 134 471 Inorganic Solute Cotransporters AT2G38290 71.302 1.26e-167 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01655 K03320 - gmx:100785993 863.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01655 06 11648049 11650835 Bva06g01655 06 11648049 11650835 ECH