Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01653 atgccCTCTGCTTCTCCTCTGTCAGTATTCTTGGTAGATTGCAGAATTCATGCGCATGTCTTAAAGCAAGGTGAGTTTTCCTCAAAGATCAATATGGTTTACCGGTGGGAACCTCTAAAACTGTTGACAAGGTGGCTGATACTGCTCAGTTTCTCAGGACTGTGCTATTCATCCTCGGATCCCGATGTGGAAGGCGAAGCATTGCTTGAACTTTTAAAGGGTCTGAATGATGTCAATCATAGAATCAACTGGGATGATCATTTGGTGAGCCCATGCTATGGTTGGTTGTACATCACTTGTAGAGATGGACATGTCATAGCCCTGAGTTTATCCTCGAATGGATTTTCTGGAAcactttctccttcaattACCAAACTGAAGTTTTTGGCTGCCTTGGAACTGCAGGACAACAATGTTTCAGGGTCTTTACCTGATTACGTTGCCAATTTGACAAACCTTGAGTATCTAAATCTTgctgataataattttagtggGCCTATACCAGCTACATGGGGTCGATTTTCCAGTCTAAAGAATTTGATATTGAGAGGGAATCACTTATCAGGACCCATTCCAGATACTATTGCAAATATCAGTGGGTTGACAACTCTGGATGTTTCAACCAACGATCTAACTGGAAGCATTCCGTTGCAACTCTTTTCAGTGTCCATCTTTAACTTTTCCAATACGCGCCTTCAGTGTGGTTCGGGCTTGGAGAAGCCTTGTGTTTCTAATTCTGATATTCCAGCTTCAACCAAGAAATCAAAACTTGCAGCGGTTGTTAGTTTCGCAGGTTGTGGTGCATTTGCACTTCTGAGTCTTGGGGCTATTTTTGCATATGGATACCATCACATGCTCAGGAGCAAAAGGGATGTTTTTGTTGATGTCTCAGGTGAAGATGAGAGCAAAGTTTCATATGGGCAACTTAGAAGATTTTCCTTGCGTGAACTTCAACTTGCTACTAACAATTTCAGCGAAAGCAACGTAATTGGTCAAGGAGGGTTTGGAAAAGTTTATAAAGGAGTACTCTCAGATCACATGAAGGTTGCAGTGAAACGCTTGGCAGATTATCATAATCCCGGGGGAGAGGCTGCATTCCAAAGGGAAGTTCAACTCATAAGTGTTGCATTTCATAGGAATCTGCTACCCTTGATTGGGTTCTGTACGACCACAACTGAAAGAATCCTCGTATATCCTTTCATGGAAAACCTTAGCGTAGCATATCGATTGAGAGATTTGAAACCTGATGAGAAAGGTTTGGATTGGGCAACAAGGAAACGTGTGGCTTTTGGTACAGCCTGCGGATTGGAGTATCTACACGAACATTGTATTCCTAAAATTATTCATCGTGATTTAAAGGCAGCAAACATCCTATTAGATGATGATTTTGAAGCTGTTCTCGGAGATTTTGGGTTGGCTAAGTTGGTTGACACAAGGTTGACGCATGTCACCACTCAAATACGTGGCACAATGGGTCATATTGCCCCAGAATATTTGTCAACTGGAAAATCATCAGAAAAGACAGACGTGTTTGGATACGGTATAACACTTCTCGAACTCGTCACTGGTCAGCGTGCAATAGACTTGTCTCGGCTGGAAGAGGAGGAGGATGTTCTTCTGCTCGATCACATCAAGAAGCTTCTGAGAGAAAACAGGCTAGAGGATATTGTGGATAGGAATTTGGAGGGTTATGATCCAAAAGAAGTTGAGGCTGTTGTTCAGGTTGCATTGCTTTGTGCCCAAGGCTCACCAGAGGAGCGGCCAACAATGTCAGAGGTGGTAAAAATGCTGCAGGGAGTGGGGTTGGCAGAGAGATGGGCTGAATGGGAGAGGGACCAACTCGAAGAGGCAAACAATCAGAAATTCTCACTCGGGAATGAAGACATTCCTTGGTACGGAGAATCTAGTCATGACCAAGAGGCTATACAGCTTTCCACACCAAGATA 1946 0.425 MPSASPLSVFLVDCRIHAHVLKQGEFSSKINMVYRWEPLKLLTRWLILLSFSGLCYSSSDPDVEGEALLELLKGLNDVNHRINWDDHLVSPCYGWLYITCRDGHVIALSLSSNGFSGTLSPSITKLKFLAALELQDNNVSGSLPDYVANLTNLEYLNLADNNFSGPIPATWGRFSSLKNLILRGNHLSGPIPDTIANISGLTTLDVSTNDLTGSIPLQLFSVSIFNFSNTRLQCGSGLEKPCVSNSDIPASTKKSKLAAVVSFAGCGAFALLSLGAIFAYGYHHMLRSKRDVFVDVSGEDESKVSYGQLRRFSLRELQLATNNFSESNVIGQGGFGKVYKGVLSDHMKVAVKRLADYHNPGGEAAFQREVQLISVAFHRNLLPLIGFCTTTTERILVYPFMENLSVAYRLRDLKPDEKGLDWATRKRVAFGTACGLEYLHEHCIPKIIHRDLKAANILLDDDFEAVLGDFGLAKLVDTRLTHVTTQIRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDLSRLEEEEDVLLLDHIKKLLRENRLEDIVDRNLEGYDPKEVEAVVQVALLCAQGSPEERPTMSEVVKMLQGVGLAERWAEWERDQLEEANNQKFSLGNEDIPWYGESSHDQEAIQLSTPR 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01653 648 ProSiteProfiles Protein kinase domain profile. 324 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01653 648 MobiDBLite consensus disorder prediction 619 648 - -
Bva06g01653 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Bva06g01653 648 SMART serkin_6 324 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01653 648 SUPERFAMILY L domain-like 64 327 - -
Bva06g01653 648 Gene3D Phosphorylase Kinase; domain 1 293 400 - -
Bva06g01653 648 Pfam Leucine rich repeat N-terminal domain 63 100 IPR013210 -
Bva06g01653 648 PANTHER LRR RECEPTOR-LIKE KINASE 40 646 - -
Bva06g01653 648 SUPERFAMILY Protein kinase-like (PK-like) 302 597 IPR011009 -
Bva06g01653 648 Gene3D Ribonuclease Inhibitor 61 244 IPR032675 -
Bva06g01653 648 Pfam Protein kinase domain 325 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01653 648 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 40 646 - -
Bva06g01653 648 Gene3D Transferase(Phosphotransferase) domain 1 401 617 - -
Bva06g01653 648 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01653 Bva-Chr6 11639739 11643678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01653 35 648 Receptor kinase-like Gene Family AT5G10290 54.619 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Bva06g01653 Pkinase 2.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01653 - - jre:108996276 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01653 06 11639739 11643678 Bva06g01653 06 11639739 11643678 ECH