Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01646 ATGGcagaaaggagagaaagaagagaaaatgagcCGAATCTGAACCTTAATGGTGACGATGGTGATAGTGCTGTCCAAGCTGACGGTCAGGACAATCATAATGCGTTTGCGCAGGTTGTCCAAATCAGAAGCAGTAGCAGTTTCCTGAGTATAAATCCAAACAATTCAAGAGCCTTGCAAATGTTAACAAGTGATGATGTGCTGGCCATGCAATTTGATTCATATGAAGCAGGGGAGTCATTTTACCATAAATATGCTTCAGCTGTGGGGTTTATTGTTCGAAAGGATGATATTGGTAGAAACAAGCAGGGAGAAGTTGTGATGAGAAAATGGGTTTGTAATAGAGAAGGCTATCgccaaagaaaatatctagAAAATGCTAATCGGCGGCGAGAACCTAGGCCATCAACTCGAGTTAATTGTCCTGCTACGTTTCGTATAAGTCTTGACCGTGGCACTCATAAGTGGGTTGTAAAAGAGTTTGTGGCAGAGCATACACATGAGTTAGCACCAACAATCAAATCGCATGCCCTCCAAATTAATGGGCCAATTATGGAAGTGGGTAAcgtaaaaaagaaaggagtaaTTAATGTTGAGGCTCAGCCTAGCCAGATGATGAATTATTTGGTGAAACAAATAGGAGATTGTGATCCAGTTGGTGCAGAAAAGCAGGACTTGAACAATCCCACTGATTCCTTATTAAGACCTGAAATTACTATTAACGATGTGGAAGCTGCACTTGCGTATCTAAGTGCCAAGAAGGATGCAGATCCCGGGTTATtctatgaaacaaaaattattgaaggtCATTTAGcatctttcttcttgtcaGATTCTATATCTCAGTTGGACTATGCATGCTTTGGAGATGTCATGGCAGTCTGTCGGATGAGTGCCTACAGGATGCATTTCGTAATATTGGCTGGTCttaatcatcatcatcaaacaAGTGTGTTTGGATGTGCCTTACTTGATGACGAGACCGTTGAGGCGTACACATGGTTGTTCCAGACCTTTCTTCATGTTATGCATGACACTATGCCCATATCCATTGTAACTGATGGCCATAAAGCTGTGCGTCAAGCTGTTCAGCAAGTTTTGCCACAATCACGACATCGGTTATGCACATGGCATCTTGAGAGAAATGCCCATTCCAGTGTTGATGACACATCCTTTGTTTCTGACCTTAAGGTGTGCATGGAGATTGTTTCACAAGATGAGTTTGAGCTTAAATGGAAGGCAATGGTCGACAAGTATAAGCTGTCTGGAAACTTGTGGATACAGAAGATGCATAAAAGGCGTCATATGTGGGCACAGGCATACTTGAGGGGACATTTCTGGGCTGGGATGCAAAGCACAAAAGTATGTGAAGTTGATATAATTAGGTGCAATGAGGTAAAAGCAGAATATGATGCGATACATGTGCAGTTTGCTCTTTCAACTCCGCTTgtaaaaattgagaaacatGCGGCTGATGTGTTTACTCGGGAATCCTATAAAAGGTTTCTTTCAGAAATGCGGTTGGAGGCACTTCTTTTTGTGTTAAACAAAGTTGACGGTACAAACTTCCGCATATACACATTGGGCAACTACGAGGATTGCAATTTAACGTATGAAGTTGTGTTCGAACCCTGTGGTCCAAGTCTTAAATGCTCATGCttaaagtttgagacaacagGGTTTCCTTGCAGTCATGCCATTCATATAATCAAATCTGAGCGACTAGAACAAATTCCCCCAAACCTTATACACCCTAGATGGACAAAATCAGCAAAGTCAACAGCACAATTGGCGCTGGCTCCAGTTGCTGGTGATGTTATCATGCGAATGGAGTGTTCTGCCACTAGCCACGGAAACGATTGTGGAGCAGCAAATAGACCTACTGCTGAGAAAGATACCATTCACAAGTCAAAAACTGCGAGATTTAAAGGGAATGGACCTTGTTACCAATCTTCACGCATCTCAAACCTCCTGACATCGAGGGCTCTTGTTGGCCTCATGTGGAGCTGCAATACTATCAACAATGGAGCATGGATGCTTGATCAGCTACTGCATGGTGGCTTCTCTTTGCTCATGGTGTGGCatgaaaacaattatattaCTTCATCGGTGAGCCTAAAGGTGAACGGGAACGAATGTCAAAAGCTGGACTTGTCCTCCTTTCTCAGAGATGCAAGTTACAGTGAATCGTGTGGATGTGAGTTGAATTTGAATTCCAGCGATTCATA 2228 0.3995 MAERRERRENEPNLNLNGDDGDSAVQADGQDNHNAFAQVVQIRSSSSFLSINPNNSRALQMLTSDDVLAMQFDSYEAGESFYHKYASAVGFIVRKDDIGRNKQGEVVMRKWVCNREGYRQRKYLENANRRREPRPSTRVNCPATFRISLDRGTHKWVVKEFVAEHTHELAPTIKSHALQINGPIMEVGNVKKKGVINVEAQPSQMMNYLVKQIGDCDPVGAEKQDLNNPTDSLLRPEITINDVEAALAYLSAKKDADPGLFYETKIIEGHLASFFLSDSISQLDYACFGDVMAVCRMSAYRMHFVILAGLNHHHQTSVFGCALLDDETVEAYTWLFQTFLHVMHDTMPISIVTDGHKAVRQAVQQVLPQSRHRLCTWHLERNAHSSVDDTSFVSDLKVCMEIVSQDEFELKWKAMVDKYKLSGNLWIQKMHKRRHMWAQAYLRGHFWAGMQSTKVCEVDIIRCNEVKAEYDAIHVQFALSTPLVKIEKHAADVFTRESYKRFLSEMRLEALLFVLNKVDGTNFRIYTLGNYEDCNLTYEVVFEPCGPSLKCSCLKFETTGFPCSHAIHIIKSERLEQIPPNLIHPRWTKSAKSTAQLALAPVAGDVIMRMECSATSHGNDCGAANRPTAEKDTIHKSKTARFKGNGPCYQSSRISNLLTSRALVGLMWSCNTINNGAWMLDQLLHGGFSLLMVWHENNYITSSVSLKVNGNECQKLDLSSFLRDASYSESCGCELNLNSSDS 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01646 742 Pfam MULE transposase domain 298 382 IPR018289 -
Bva06g01646 742 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 68 454 - -
Bva06g01646 742 Pfam FAR1 DNA-binding domain 80 170 IPR004330 -
Bva06g01646 742 MobiDBLite consensus disorder prediction 1 15 - -
Bva06g01646 742 SMART 26again6 549 576 IPR006564 GO:0008270
Bva06g01646 742 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 464 613 - -
Bva06g01646 742 MobiDBLite consensus disorder prediction 1 28 - -
Bva06g01646 742 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 464 613 IPR031052 GO:0006355
Bva06g01646 742 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 68 454 IPR031052 GO:0006355
Bva06g01646 742 ProSiteProfiles Zinc finger SWIM-type profile. 538 574 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01646 Bva-Chr6 11599619 11603758 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bva06g01646 FAR1 3.1e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01646 - - adu:107463166 527.709