Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01642 ATGGCCCAGGTTGCATTAACTGCTTCAGCTACAAGCTTGGCCTTTCACTGCGGAGCAAAACATTGGAATAAACTATCCCAAAGTTTTTCGAGAAACAGAGGAACTAATTCATCATCATTCACAAATTTCCCATTCCCAAGGAAACACTTTCAAGTGCGGGTTTTTGCTTCAGGAGCAACTGGGAGTAATGGAGGTCTCGCAGAGATATCTGAACATGAAAAAGCCCCGAGAACTTTCACGTGGCCTGATAAGAAGAGGCCTAGGGTTTGCATCTTGGGTGGCGGATTTGGAGGTTTATATACTGCTTTAAGATTAGAGTCACTTGTATGGCAAGAGGACACAAAACCGCAGGTTGTTCTTGTAGACCAGTCTGAACGATTTGTTTTTAAGCCAATGTTGTATGAGCTTCTATCAGGAGAAGTGGACGAATGGGAAATAGCTCCTCGTTTCTCAGATTTGCTGGCAAACACTGGTGTGCAATTTTTCCAGGACAGAGTTAAACTTTTACATCCCTCTGATCACTGGGGAAAGAATGGACCCACCGCACGCAGTTATGGAGGAATTGTGCATCTTGAAAGTGGCCTTCTTATTGAATATGACTGGCTGGTTCTTGCATTGGGAGCTGAAGCTAAACTAGATGTTGTACCAGGAGCAACAGAGTTTGCATTGCCATTCTCCACATTAGAGGATGCACGTAAGGTTAATGACAAGTTGAGAACATTGGAGAGAAAGACCTTTGGTAAGAAATCCCAAATTAGCGTGGCAGTTGTTGGTTGTGGTTACTCTGGAGTTGAATTAGCTGCTACAGTTGCTGAGAGATTACAGGATAGAGGAATTGTGAGAGGTATTAATGTTGAAAAAATGATCTGCCCAAATGCCCCCCCTGGCAATAGGGAAGCTGCACTAAGAGTTCTTTCATCTAGAAAGGTAGAACTTTTATTGGGTTACTTTGTCCGCTGTATTCGAAGGGTGAGTGACTTGGAGTCTTCAGATGCCATTGCAGCATCACATGATTCAGAGAAGTATATATTGGAACTTCAACCAGCTGAAAGGGGATCAGAAAGTAAAATTCTCGAGGCAGATTTGGTATTGTGGACTGTTGGATCTAAACCTCCTCTTCCTCAACTGGAATCCTCGGATGTATCACATGTGCTTCCACTTAATACTCGGGGGCAAGCAGAAACTGATGAAACTCTTCGTGTCAAGGGTCATCCACGGATATTTGCACTTGGTGACTCTTCTGCTTTAAGGGATTCAAATGGAAGGATTCTTCCAGCCACAGCACAGGTTGCATTTCAGCAAGCGGACTTTACTGGTTGGAATCTGTGGGCTGCTATAAATGGCCGTCCACTTTTGCCATTTAGGTTTCAAAATTTAGGCGAAATGATGACCCTGGGAAGAAATGATGCTGCAGTTTCTCCTAGTTTTATTGAGGGGCTAACCTTAGATGGTCCTACTGGTCATGCTGCAAGGAAGATAGCATATTTGATCAGGTTACCAACAGACGAACATAGGCTTAAAGTGGGGATCAGTTGGCTTACAAAATCAGCTGTTGATTCAGTGGCATCGCTACAGAATACCCTAGCCAAATTTATTTCCGGCCCGTA 1607 0.4381 MAQVALTASATSLAFHCGAKHWNKLSQSFSRNRGTNSSSFTNFPFPRKHFQVRVFASGATGSNGGLAEISEHEKAPRTFTWPDKKRPRVCILGGGFGGLYTALRLESLVWQEDTKPQVVLVDQSERFVFKPMLYELLSGEVDEWEIAPRFSDLLANTGVQFFQDRVKLLHPSDHWGKNGPTARSYGGIVHLESGLLIEYDWLVLALGAEAKLDVVPGATEFALPFSTLEDARKVNDKLRTLERKTFGKKSQISVAVVGCGYSGVELAATVAERLQDRGIVRGINVEKMICPNAPPGNREAALRVLSSRKVELLLGYFVRCIRRVSDLESSDAIAASHDSEKYILELQPAERGSESKILEADLVLWTVGSKPPLPQLESSDVSHVLPLNTRGQAETDETLRVKGHPRIFALGDSSALRDSNGRILPATAQVAFQQADFTGWNLWAAINGRPLLPFRFQNLGEMMTLGRNDAAVSPSFIEGLTLDGPTGHAARKIAYLIRLPTDEHRLKVGISWLTKSAVDSVASLQNTLAKFISGP 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01642 535 PRINTS Pyridine nucleotide disulphide reductase class-I signature 253 278 - -
Bva06g01642 535 PRINTS Pyridine nucleotide disulphide reductase class-I signature 407 414 - -
Bva06g01642 535 PRINTS Pyridine nucleotide disulphide reductase class-I signature 88 110 - -
Bva06g01642 535 PANTHER ALTERNATIVE NAD(P)H-UBIQUINONE OXIDOREDUCTASE C1, CHLOROPLASTIC/MITOCHONDRIAL 1 532 - -
Bva06g01642 535 SUPERFAMILY FAD/NAD(P)-binding domain 86 274 IPR036188 -
Bva06g01642 535 Gene3D - 84 508 - -
Bva06g01642 535 Pfam Pyridine nucleotide-disulphide oxidoreductase 88 435 IPR023753 GO:0016491
Bva06g01642 535 SUPERFAMILY FAD/NAD(P)-binding domain 247 449 IPR036188 -
Bva06g01642 535 PRINTS FAD-dependent pyridine nucleotide reductase signature 360 376 - -
Bva06g01642 535 PRINTS FAD-dependent pyridine nucleotide reductase signature 89 108 - -
Bva06g01642 535 PRINTS FAD-dependent pyridine nucleotide reductase signature 199 217 - -
Bva06g01642 535 PRINTS FAD-dependent pyridine nucleotide reductase signature 253 271 - -
Bva06g01642 535 PANTHER APOPTOSIS-INDUCING FACTOR 1 1 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01642 Bva-Chr6 11576150 11580445 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01642 37 436 Chloroplast and Mitochondria Gene Families AT4G21490 22.573 1.70e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01642 K17872 - gmx:100795521 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01642 06 11576150 11580445 Bva06g01642 06 11576150 11580445 ECH