Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01641 ATGGGAGATGGTATTGTTGGCAGCAGCAGCCGGGGCAATCCCCACAACAGCAGTAATAGTGGCAATAGCAATAAGCCCGAGTGGCTACAGCAATATGATCTCATAGGGAAGATTGGTGAAGGTACCTACGGTCTTGTGTTCCTTGCAAGAACCAAGGCTCCAACCAATCGTGGAAAATCCATTGCCATCAAGAAATTCAAGCAGTCCAAGGATGGTGATGGCGTCTCACCCACTGCAATTCGTGAAATTATGTTACTCAGGGAGATAACGCACGAAAATGTTGTGAAGCTGGTCAATGTTCACATCAATCATGCGGACATGTCTCTGTATCTGGCTTTTGATTACGCTGAACATGACCTTTATGAAATCATTAGACATCATAGGGACAAGGTCAACCATTCCATTAATCAATACACAGTTAAATCATTACTCTGGCAGCTGCTTAATGGATTAAACTATCTGCATAGTAATTGGATAATTCATCGTGATCTAAAGCCATCAAATATATTGGTTATGGGTGAAGGAGAGGAACATGGTGTGGTTAAAATTGCTGACTTTGGACTTGCAAGAATATATCAGGCCCCCTTGAAGCCGTTATCTGAAAATGGAGTTGTTGTAACCATCTGGTATCGTGCCCCCGAGTTGCTTCTTGGGGCAAAACATTATACAAGTGCTGTTGATATGTGGGCTGTTGGATGCATTTTTGCTGAGCTGTTGACCTTGAAGCCACTATTTCAAGGGGCAGAAGTTAAAGCCACGCCAAATCCATTTCAGCTTGATCAACTTGACAAGATATTCAAGGTTCTAGGCCATCCCACATTGGAAAAGTGGCCTTCCCTTGCAAATCTTCCCCATTGGCAGCAGGACCTACAGCATATACAAGGGCACAAATATGACAACACTGGCCTTTATAATGTTGTTCACCTGTCTCCAAAAAGTCCTGCGTATGACCTCTTGTCAAAGATGCTTGAATATGATCCTCGAAAACGTATAACAGCTGCACAAGCTTTAGAGCATGAgtattttaaaattgaaccaCTACCTGGGCGGAATGCACTGGTACCCTGCCAACATGGAGAGAAAATTGTGAATTATCCCACGCGTCCAGTGGACACAACAACAGATTTTGAAGGGACAACCAATCTTCAACCTCCACAACCGGCTTCGTCTGGAGCAGCAGTTTCTGGCAACATGCCAGGCGCCCATGTATCAGGCAGACCTGTCCCTCGCCCAGCGAATGGTTTTGGCATGCAAAGGATACCGCCTCAGGCAATGCAAGCTTATAATCTCACATCTCAGGCGGGAATGGGTGGTGGAATGAATCCTAGTAGCATCGCTATGCAACGAGGTGTTGCTGCACAGGCCCATCAGCAGCAACAGTTGAGAAGGAAAGACCAAGGAATGGGGATGCCAGGATACCCTCCTCAGCAGAAGTCAAGGCGCATATA 1448 0.453 MGDGIVGSSSRGNPHNSSNSGNSNKPEWLQQYDLIGKIGEGTYGLVFLARTKAPTNRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHRDKVNHSINQYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEHGVVKIADFGLARIYQAPLKPLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGAEVKATPNPFQLDQLDKIFKVLGHPTLEKWPSLANLPHWQQDLQHIQGHKYDNTGLYNVVHLSPKSPAYDLLSKMLEYDPRKRITAAQALEHEYFKIEPLPGRNALVPCQHGEKIVNYPTRPVDTTTDFEGTTNLQPPQPASSGAAVSGNMPGAHVSGRPVPRPANGFGMQRIPPQAMQAYNLTSQAGMGGGMNPSSIAMQRGVAAQAHQQQQLRRKDQGMGMPGYPPQQKSRRI 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01641 482 MobiDBLite consensus disorder prediction 9 26 - -
Bva06g01641 482 MobiDBLite consensus disorder prediction 379 402 - -
Bva06g01641 482 MobiDBLite consensus disorder prediction 379 393 - -
Bva06g01641 482 ProSiteProfiles Protein kinase domain profile. 32 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01641 482 CDD STKc_CDK8_like 31 342 - -
Bva06g01641 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Bva06g01641 482 SUPERFAMILY Protein kinase-like (PK-like) 27 343 IPR011009 -
Bva06g01641 482 MobiDBLite consensus disorder prediction 1 26 - -
Bva06g01641 482 SMART serkin_6 32 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01641 482 Gene3D Phosphorylase Kinase; domain 1 12 114 - -
Bva06g01641 482 Pfam Protein kinase domain 32 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01641 482 ProSitePatterns Protein kinases ATP-binding region signature. 38 65 IPR017441 GO:0005524
Bva06g01641 482 Gene3D Transferase(Phosphotransferase) domain 1 115 356 - -
Bva06g01641 482 MobiDBLite consensus disorder prediction 449 482 - -
Bva06g01641 482 PANTHER CYCLIN-DEPENDENT KINASE E-1 20 481 - -
Bva06g01641 482 MobiDBLite consensus disorder prediction 449 464 - -
Bva06g01641 482 PANTHER CELL DIVISION PROTEIN KINASE 20 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01641 Bva-Chr6 11568736 11574990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01641 25 482 Core Cell Cycle Gene Families AT5G63610 78.696 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Bva06g01641 Pkinase 7.6e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01641 K02208 - gmx:100813433 832.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01641 06 11568736 11574990 Bva06g01641 06 11568736 11574990 ECH
Bva05g00130 05 644803 651296 Bva06g01641 06 11568736 11574990 ECH