Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01638 ATGGGCAGGGAAAATTTGtcagaaatgaaaaaggaagaagtcGGTGATGTTGGTTCCTCAAGTGGTGAGACCGAGGATTTAGAATCTCACTCTGAACATAGTCTGGAGAAGGAGACAGGCTCGAGAAGTTGTCGTGTCTGCCAATGTGCTGAATCTGATAAAAGGGGAGATGCTGCACTAGAATTTTTGCGTATTACTCCAATTATAGAAGTGTGTAAAAACAACGGGGAAGTGAGCACGAATGGCCAGGAAATTCCAAATGATGTTTCTCTTCAAAGAAATATTGGAAGCAAGTCTGGAGTTGGGGTGGTGGAGTTTGTAAGCCCTGATGGAGAGGTTTTTATTTGTAACACTGATTTGGAAACAGGTCTGTCTCATCGGGACACATTAGTTGAACTTGGTTGTTGTTGTAAAAATGACCTTGCCCTTGTACACTATGCTTGTGCACTCAAATGGTTTGTCAACCATGGATCTACCATTTGTGAAATATGTGGACATCTGGCCAAAAATATCAGAATTTTGGACTTCAATAAAGTTGTTGGTTCTTTGAAGGAGTACGAGGCATTGAGGGAAAGAACGGCATGCGGGGAACCCAGTCTTGCTCAAGTTCAAGGAAACACTGGTGTGGATCCTGATGCCGTGGCTGCTATTCGGAGGCAACAGCTAAGTGAGATTGCACTATGGTTTTGCCCGCATAATAACAGTAACAATAACAACGCAGATTCAGTTTCACAGGTAGTTTCTGAACAACCTTTGAACTCTGTTGCCGAGGACGCTACCCCTGCTGAAAATCCTGCAACTAAGTGGGCCATAGAAGGAACTGGGATCATGCTTGCTACCGGACTACTTACTGTCACCCTTGCATGGCTTATAGCTCCTCGTGTTGGAAAGAGTACTGCAAAAAGTGGTCTTCATATCCTACTCGGAGGCATTTGTGCTTTGACGGTTGTGGTTTTCTTCCGCTTTTTCGTGCTGACGAGAATCAAATATGGACCTGCGCGTTATTGGGCaatcttgtttgttttctgGTTTCTTGTATTTGGAATATGGGCTTCGCGGACACACACTGCCCATACAACGTG 1082 0.4307 MGRENLSEMKKEEVGDVGSSSGETEDLESHSEHSLEKETGSRSCRVCQCAESDKRGDAALEFLRITPIIEVCKNNGEVSTNGQEIPNDVSLQRNIGSKSGVGVVEFVSPDGEVFICNTDLETGLSHRDTLVELGCCCKNDLALVHYACALKWFVNHGSTICEICGHLAKNIRILDFNKVVGSLKEYEALRERTACGEPSLAQVQGNTGVDPDAVAAIRRQQLSEIALWFCPHNNSNNNNADSVSQVVSEQPLNSVAEDATPAENPATKWAIEGTGIMLATGLLTVTLAWLIAPRVGKSTAKSGLHILLGGICALTVVVFFRFFVLTRIKYGPARYWAILFVFWFLVFGIWASRTHTAHTT 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01638 360 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 24 359 - -
Bva06g01638 360 SUPERFAMILY RING/U-box 129 167 - -
Bva06g01638 360 Pfam RING-variant domain 130 164 IPR011016 GO:0008270
Bva06g01638 360 ProSiteProfiles Zinc finger RING-CH-type profile. 105 171 IPR011016 GO:0008270
Bva06g01638 360 MobiDBLite consensus disorder prediction 1 38 - -
Bva06g01638 360 SMART ringv_2 115 165 IPR011016 GO:0008270
Bva06g01638 360 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 109 173 IPR013083 -
Bva06g01638 360 PANTHER ZINC FINGER, RING-CH-TYPE 24 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01638 Bva-Chr6 11560406 11564905 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01638 1 350 C3H Transcription Factor Family AT5G08750 63.812 3.08e-150 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01638 - - gmx:100805323 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01638 06 11560406 11564905 Bva06g01638 06 11560406 11564905 ECH