Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01634 ATGAAGAGTGAATTAGAGTTGCCGCctggattcagatttcacccaACAGACGAGGAACTCGTGAACCACTATTTGTGTAGGAAATGTGCTTCGCAGTCGATTGCTGTTCCGATTATCAAAGAGATTGATTTGTATAAGTTTGACCCATGGCAGCTTCCAGGAATGGCTCTTTACGGAGAGAAAGAGTGGTCTGCCGGCAAGAAAACTAATTTAAGGCTCGATGATTGGGTATTATGCCGAATTTACAACAAGAAAGGCACCATAGAGAAATATGGACCCATGGATCAGAAATTACAAAAGTTTTCTGACATGCACGAGCACGAGACAAAGCCAGAAATCACAATGCTGGGCCAACAAAACATGGTAGCACCATCAACATTCACGAGCGACCAATTGTATATGGACACGTCGGATTCGGTACCAAGGGTGCACACCGACTCGAGCAGCTCGGAGCACGTGGTTTCACGGGATATCACGTGGGACAGGGAGGTCCAGAGCGAACCAAAGTGGAATGAGCTAGGACTAGGATTAGGAGATGCCTTTGATTTTCAGTTCAATTACATGGACAACCTCTCGTCGGATGACCCTTTTGCCCCTGGGGATCCGGCCCAGCTCTCCCCCTTGCAGGACATGTTCATGTATCTACAGAAGCCATTTTG 659 0.4583 MKSELELPPGFRFHPTDEELVNHYLCRKCASQSIAVPIIKEIDLYKFDPWQLPGMALYGEKEWSAGKKTNLRLDDWVLCRIYNKKGTIEKYGPMDQKLQKFSDMHEHETKPEITMLGQQNMVAPSTFTSDQLYMDTSDSVPRVHTDSSSSEHVVSRDITWDREVQSEPKWNELGLGLGDAFDFQFNYMDNLSSDDPFAPGDPAQLSPLQDMFMYLQKPF 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01634 219 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 5 63 - -
Bva06g01634 219 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 67 198 - -
Bva06g01634 219 SUPERFAMILY NAC domain 4 84 IPR036093 GO:0003677|GO:0006355
Bva06g01634 219 Pfam No apical meristem (NAM) protein 8 63 IPR003441 GO:0003677|GO:0006355
Bva06g01634 219 Gene3D NAC domain 16 65 IPR036093 GO:0003677|GO:0006355
Bva06g01634 219 PANTHER NAC TRANSCRIPTION FACTOR 56 5 63 - -
Bva06g01634 219 PANTHER NAC TRANSCRIPTION FACTOR 56 67 198 - -
Bva06g01634 219 ProSiteProfiles NAC domain profile. 7 160 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01634 Bva-Chr6 11548072 11549960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01634 1 63 NAC Transcription Factor Family AT1G01720 85.714 1.36e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva06g01634 NAM 3.8e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01634 - - qlo:115973450 195.667