Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01617 ATGTCCGCAGAAACAGATCGGATGGGCAGAGAGGAAGGGACAGAAAATAACCTCAAAGAGCGAAAAGTGTCATGGACAAAGCTCCGCCGCGTCGACTCCCTCAATTTGGAAGCCGGAAGAGTCTCCGGCGGTGGCATTCACCCCTCCTCGTTTAGTTGGAAGACGACGCTGAGCTTAGCATTTCAAAGCATAGGGATAGTATATGGGGATATTGGGACGTCTCCACTTTATGTGTATGCAAGCACTTTCACCGACGGTATCAAAAACAAGGATGACATTCTCGGTGTCTTGTCTCTCATCATCTATACCATTCTGCTAATACCTATGCTTAAGTATGTTTTCATCGTACTGTGGGCTAATGACAACGGTAACGGCGGAGCATTTGCACTCTATTCCTTGATATGTCGGTATGCGAAGGTGAGTTTGATTCCAAATCAGCAACCAGAGGATAGGGAGCTTTCAAACTATAGGCTGGAGACGCCATCGAACCAGATGAAACGAGCCCAAAAAGTAAAGCACAAGCTTGAGAATAGTAAAATGGCACGAGTTACTCTTTTGCTTTTAGCCATAATGGGAACTTCTATGGTAATAGGAGACGGGATTCTTACTCCATCAATTTCAGTACTCTCTGCGGTAAGCGGGATCGGTTCATTAGGCCAAGaTGCTGTTGTGGGTATCTCCATAGTGATCTTGGTGTTCCTCTTTTCTGTCCAACGATTTGGGACAGATAAAGTGGGATTCTCGTTCGCTCCAATTATCATGGTGTGGTTTACATTCATCGCAGGAATTGgcctttataatttattcaaatacgAAGTTGGTGTATTACGTGCTTTTAATCCAAAATACATATTTGATTACTTCAAAAGAAATGGTAAAAGAGGATGGATATCGCTCGGTGGGGTCTTTCTTTGCATTACAGGATCCGAGGCCATGTTTGCCGACTTGGGCCACTTCAATGTACGAGCCATTCAAATTAGCTTCTCTTGCATTACATTTCCTTCATTGCTGGCGGCCTATAGTGGGCAAGCAGCATACCTGCGAAAGTTCCCTGACAAAGTGGGTAATACTTTCTATGAATGTATACCTGATCCCCTATACTGGCCAACATTTGTTGTGGCTGTAGCTGCTGCCATTATAGCAAGCCAAGCTATGATTTCGGGAGCATTTTCCATTATATCCCAGGCGCTAAGTCTAGGTTGTTTCCCAAGGGTTAAGGTTGTGCATACGTCTGTTGAGCATCAAGGCCAGGTGTATATTCCTGAGGTCAACTACATGTTCATGATTGCGTGTATTGTTATCAGTGCTGCATTCAGGACCACGGAAAAGATTAGTCATGCATATGGGATAGCTGTAGTCTGTGACATGCTCATCACGACAACGTTGGTTTCCCTGATAATGCTGATTATATGGAAGAAAAGCGTATGGCAGATTGTTCTCTTTTATGTGGCATTCGGTCTCACGGAAGGATTTTATTTGTCATCTCAATTATACAAATTACCACAGGGAGGGTATCTTCCGCTTGTATCCGCTTTCTTCTTGACCATGGTCATGGGGATCTGGTATTATGTGCACAAGCAAAGATACATGTTTGAGCTCAAAAACAAGGTTTCCAGTGAATATATCAAAGAGCTGAGCAGCAACCCGCATATAAACCGTGTCCCTGGAATTGGACTTCTCTATTCTGAGCTTGTACAAGGAATTCCTCCTATTTTCCCACATTTCATTGCCAACGTACCCTCCGTCCACTCTGTTGTCGTGTTTGTTTCCATAAAGCAAATTCCTATCAGTAGAGTTGCactggaagagagatttctgTTTCGACGTGTGGAGCCAAGAGAGTACAGAATGTTTCGTTGTGTTGTGAGGTATGGTTACAAGGATGCAATTGAGGAACCTCAGGAGTTTGAATCACTGTTGGTACACCATTTGATGGAATTTATTCGACAAGAAAACATCATGCTTGAAGCTGAGGGAACAACAACCACCGAAGAAGCTGCTACAACTGACAATGAGACAGCAAACATGTCACGAGGTGCTGTTGCTGCAGCTCAAGGTTCATCGGATTATTCCATTGGATCACAAGATGTGGGTGTGGCTAAGTCATCCAATTTCTCTGCCCCTCCCATTCAGGGAGTTGATGAGGAGATCGAGTTTGTGGAGAAAGCAAAGGAGATGGGTGTAGTATATCTGCTAGGGGAAGCAGAGGTAGTGGCGGAGCCTAAATCATCATTCCTTAATAAGCTAGTCGTCAACTATGCCTATAGGTTCCTGAGAAAGAACTTTCGGCAAGGAGATAAAATGATGGCAATTCCTCATAGGAGGCTTCTCAAGGTTGGAATGACATACGAAATCTG 2357 0.434 MSAETDRMGREEGTENNLKERKVSWTKLRRVDSLNLEAGRVSGGGIHPSSFSWKTTLSLAFQSIGIVYGDIGTSPLYVYASTFTDGIKNKDDILGVLSLIIYTILLIPMLKYVFIVLWANDNGNGGAFALYSLICRYAKVSLIPNQQPEDRELSNYRLETPSNQMKRAQKVKHKLENSKMARVTLLLLAIMGTSMVIGDGILTPSISVLSAVSGIGSLGQDAVVGISIVILVFLFSVQRFGTDKVGFSFAPIIMVWFTFIAGIGLYNLFKYEVGVLRAFNPKYIFDYFKRNGKRGWISLGGVFLCITGSEAMFADLGHFNVRAIQISFSCITFPSLLAAYSGQAAYLRKFPDKVGNTFYECIPDPLYWPTFVVAVAAAIIASQAMISGAFSIISQALSLGCFPRVKVVHTSVEHQGQVYIPEVNYMFMIACIVISAAFRTTEKISHAYGIAVVCDMLITTTLVSLIMLIIWKKSVWQIVLFYVAFGLTEGFYLSSQLYKLPQGGYLPLVSAFFLTMVMGIWYYVHKQRYMFELKNKVSSEYIKELSSNPHINRVPGIGLLYSELVQGIPPIFPHFIANVPSVHSVVVFVSIKQIPISRVALEERFLFRRVEPREYRMFRCVVRYGYKDAIEEPQEFESLLVHHLMEFIRQENIMLEAEGTTTTEEAATTDNETANMSRGAVAAAQGSSDYSIGSQDVGVAKSSNFSAPPIQGVDEEIEFVEKAKEMGVVYLLGEAEVVAEPKSSFLNKLVVNYAYRFLRKNFRQGDKMMAIPHRRLLKVGMTYEI 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01617 785 TIGRFAM kup: potassium uptake protein 59 785 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bva06g01617 785 PANTHER POTASSIUM TRANSPORTER 5 17 784 - -
Bva06g01617 785 Pfam K+ potassium transporter 60 628 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bva06g01617 785 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 17 784 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01617 Bva-Chr6 11458446 11462019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01617 1 785 Inorganic Solute Cotransporters AT4G13420 61.286 0.0 999
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01617 K03549 - gmx:100814313 1134.4