LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva06g01577	ATGGATCCAGAATCATTCCCCACCAGCATATTTAAGTGGGACCCCCGTAGCTTCCTTCCAGCTGCAACGACTAGCCGACCTCCCATGCTGGAGTACTCCGCGTCGATGGCTCCTCCAGTTCCGGCGGCGGCATATCCGGCGAGGGCGCCGAGGGAGCTCGGAGGATTAGAGGAGTTGTTCCAAGCTTATGGTATCAGATACTATACGGCAGCCAAAATAGCAGAGCTTGGGTTCACGGTGAATACCCTTGTGGATATGAAGGACGAGGAGCTCGATGACATGATGAACAGCCTCTCTCAGATTTTCCGCTGGGATCTGCTCGTCGGGGAGCGATACGGCATCAAAGCCGCCATAAGAGCCGAACGAAGACGCATAGACGAAGAGGAAATCAGGCGCCGCAACCTTATCTCCGGGGACACCACAACCACTACAACCAACGCACTAGATGCTTTATCCCAGGAAGGGTTGTCGGAGGAGCCGGTGAtgcaacaagaaaaagaggCGATGGTAAGCGGGGGAGGGAGCACGTGGGATGTGACGGGCGTGGGGGTGAGGAAACAACAACAGAGGAGGAGGCGAAGGCCGAGGATGAAAACTAATAGGCACGGGCATCAGAGTGATGAtcgagaagaagaagaggaagaaaacgAAGACAACAATAACAGTGGTGGTGGAAGCTgcgagagacagagagagcaCCCATTCATCGTCACCGAGCCTGGGGAAGTTGCACGTGGCAAGAAGAACGGTCTTGATTACCTTTTCCACCTCTACGAGCAATGCCGGGAGTTCTTGATTCAAGTCCAGAACATAGCCAAAGACCGTGGCGAGAAATGCCCCACCAAGGTGACAAACCAGGTATTCAGGTACGCCAAGAAAGCAGGAGCAAGCTACATTAACAAGCCAAAAATGCGGCACTACGTCCACTGCTACGCCTTGCACTGTCTTGACGAGCAGGTTTCCAATGAACTGAGAAGGGCTTTCAAGGAGAGAGGAGAGAACGTTGGGGCGTGGAGGCAAGCTTGCTATAAGCCACTGGTGGCAATTGCAGCACGTCAAGGTTGGGACATCGATGCCATCTTCAATGCACATCCTCGTCTTTCCATTTGGTACGTCCCAACCAAGCTTCGTCAGCTTTGTCATGCCGAGAGGAACAGCCACGGCGCCGCTGCGTCAACCTCTGTCTCTATTGGGAATACCCACCTCCCTTTCTA	1214	0.5124	MDPESFPTSIFKWDPRSFLPAATTSRPPMLEYSASMAPPVPAAAYPARAPRELGGLEELFQAYGIRYYTAAKIAELGFTVNTLVDMKDEELDDMMNSLSQIFRWDLLVGERYGIKAAIRAERRRIDEEEIRRRNLISGDTTTTTTNALDALSQEGLSEEPVMQQEKEAMVSGGGSTWDVTGVGVRKQQQRRRRRPRMKTNRHGHQSDDREEEEEENEDNNNSGGGSCERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEQVSNELRRAFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERNSHGAAASTSVSIGNTHLPF	404

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva06g01577	404	Pfam	DNA Binding Domain (C-terminal) Leafy/Floricaula	222	387	IPR035209	GO:0003677
	Bva06g01577	404	Gene3D	Protein LEAFY	218	388	IPR038276	-
	Bva06g01577	404	PANTHER	PROTEIN LEAFY	1	403	IPR002910	GO:0003677\|GO:0006355
	Bva06g01577	404	MobiDBLite	consensus disorder prediction	152	238	-	-
	Bva06g01577	404	MobiDBLite	consensus disorder prediction	186	200	-	-
	Bva06g01577	404	Pfam	Floricaula / Leafy protein SAM domain	52	129	IPR035079	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva06g01577	Bva-Chr6	11282826	11284943	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva06g01577	1	386	Orphan Transcription Factor Family	AT5G61850	66.000	6.28e-164	465

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	LFY	Bva06g01577		C_LFY_FLO	7e-109	CL0123

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva06g01577	-		-	gsj:114416001	594.349

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva06g01577	06	11282826	11284943	Bva06g01577	06	11282826	11284943	ECH