Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01566 ATGCATTTCGCAAAGCTCGATGATACGCCCATGTTCCGGCAACAGCTCCAATGCTTGGAAGAAAGTGCGGACTCCTTAAAGACGAGATGCTGGAAATACCACAAAGCATGTCGCAAGTACACGGAAGGGCTTGGTGAGGGGTATGATGGAGACATCGCATTTGCAAGTGCTCTTGAAAGTTTTGGAGGAGGGCATAATGATCCTCTTTTTGTTGCTCTGGgagGACCGGTTATATCCAAATTCACAATTGCTTTGAGAGAAATCGGTACATACAAGGAAGTTCTTAGGTCACAGGTAGAACACATGCTGACTGACCGATTGCAACAATATGTTAATGTTGATATCCTTGATGTCAAGGAAGCTAGGAAGCGATTCGACAAGGCTTCCATTTTATATGACCAGGCACGTGAGAAGTTTATGTCACTGAAAAAGAGCACTAAGGTTGATATTGCCACTGTCTTAGAAGAGGAATTGCACAACGCAAGGTCCTCATTTGAGGAAGCCCGCTTCAATCTGGTTAGTGCTCTTAATAATGTCGAGGCGAAGAAGACATTTGAATTTATGGAGGCTGTCACTGCAGTCATGGATGCTCATCTTCGATACTTTCAACAGgGATATCAGCTATTACGTCAGATGGAACCTTTCATTACCGAGGTTCTAGCCTATGCACAACATTTAAGAGAAACTAACAATACGGAGCAGAGTTCTCTGTATCATAGAATGCAAGATTACATAAAACAAGCTGATCAAGAAAGTAGGCTGTCCTTgaacggcccttgtgcttctCCTAGAGGAGACTCTGTGCAGCATTTTCCTAGAATATCGAATGAAGTGGCGGATGCAGTAATGGAATCTGCTTCAAATGGAAAGGTTCAAATTATTCGACAAGGGTATCTTTCAAAACGCTCCTCCAATCTGAGGGCTGACTGGAAGAGAAGGTATTTTGTTCTAGATAGTCGAGGGGTGCTGTACTACTATCGCAAACCATGGAACTGGTCATATGGTAGCTGTCAACCATCTGCGCTAAGGAATAGTGCCCCAGAAAATTCATCTGGTCTTCTGAACCGGTTGCTTATTTCCAATCACCCTGGGGTTGTCCATGATGAAAGATCTGTAGCACGTCATGCAGTGAACCTGCTTACATCAACAATTAAGGCCGATGCTGATCAGTCGGATTTAAGATTCTGCTTCAGGATTATTTCACCGTCAAAGAGTTTTACATTGCAGGCAGAAAATGCATTGGACCAGATGGATTGGATTGAGAAGATAACTGGAGTAATTGCCTCCTTGTTGAGTGTCCAGACAATAGAAAAGCCTCTCTCAGCTGAATCAGAAAGCGGTGACTTTCACTCTGCTGGCAAGATTATGTTAGCAAATTCTCCAGGTCATAATCATGTCGTGACTCAGGAACATGTGTCAAAGAACTTCACTTCTAACAACCACACAAGAACATCCAAAAGTTCGCAGTGCCTTAAACAAAGTGTAAAAGGTGAAAAGCCAATTGACGTTCTTAGAAGAGTATGCGGGAATGATAAATGTGCTGATTGTGGTAAACCTGAACCAGACTGGGCATCCCTGAACCTTGGCATTCTTATATGCATTGAATGTTCTGGTGTTCATCGTAATCTTGGTGTACATATATCAAAGGTAAGATCATTAACACTTGATGTGAAAGTCTGGGATCCCTCTGTCTTAACCATGTTTCAGTCACTGGGCAATCTCTTCGCTAACTCTGTTTGGGAAGAGCTGTTGTATTCATCAAGCGTTTCGCAAACTGATGAGACTCCTGTTCGTTCATCCAAGGCCAACAGAAACAAGCTATTTCATGCGAGGAGACTAGAACATGATGATCCTATTTCTATGAAGGAGAGCTTTATTCATGCCAAATATTTGGAGAAAGTCTTTGTTCGCCAGGTAAGGAAAGACCACCGTCTCCTTTCAGTGGCACAACAAGTGTGGGAAAGTGTCCGAACCAATGACAAGAAAGCAGTATACCGGCATATTGTCTGGTCAAATGTGGATGTCAATACAATCAGCGGTCAAGCATCTTCTGGTGAATCGTTCAACAAGCCTTCTTCAAGTAATTCAGACTCATCATGTAAAAGTGAAAATCAGTTAATGGAAGAAATACTAAAAGATAGTTTTAGTGTGCTTCACCTGGCATGCCTTACTGCCGACATTGGTATGGTGGAGCTACTGCTACAGAATGGTGCAGATATAAATGCTTCTGATTCCAGTGGTCGGACGCCACTGCATTATTGTATTATTGGAGGAAAGGCCGCTGCAGCTAAAGTGCTTCTTATGAGGGGAGCCAATCCAAAGGCCGTAGATAATGAAGGTAATACTCCTCTTAAACTTGTGTCCCCATCACATTCTATTGGCAAAGACATTGTCGCTCTTTTGATCGAAGCACACGGATG 2420 0.4244 MHFAKLDDTPMFRQQLQCLEESADSLKTRCWKYHKACRKYTEGLGEGYDGDIAFASALESFGGGHNDPLFVALGGPVISKFTIALREIGTYKEVLRSQVEHMLTDRLQQYVNVDILDVKEARKRFDKASILYDQAREKFMSLKKSTKVDIATVLEEELHNARSSFEEARFNLVSALNNVEAKKTFEFMEAVTAVMDAHLRYFQQGYQLLRQMEPFITEVLAYAQHLRETNNTEQSSLYHRMQDYIKQADQESRLSLNGPCASPRGDSVQHFPRISNEVADAVMESASNGKVQIIRQGYLSKRSSNLRADWKRRYFVLDSRGVLYYYRKPWNWSYGSCQPSALRNSAPENSSGLLNRLLISNHPGVVHDERSVARHAVNLLTSTIKADADQSDLRFCFRIISPSKSFTLQAENALDQMDWIEKITGVIASLLSVQTIEKPLSAESESGDFHSAGKIMLANSPGHNHVVTQEHVSKNFTSNNHTRTSKSSQCLKQSVKGEKPIDVLRRVCGNDKCADCGKPEPDWASLNLGILICIECSGVHRNLGVHISKVRSLTLDVKVWDPSVLTMFQSLGNLFANSVWEELLYSSSVSQTDETPVRSSKANRNKLFHARRLEHDDPISMKESFIHAKYLEKVFVRQVRKDHRLLSVAQQVWESVRTNDKKAVYRHIVWSNVDVNTISGQASSGESFNKPSSSNSDSSCKSENQLMEEILKDSFSVLHLACLTADIGMVELLLQNGADINASDSSGRTPLHYCIIGGKAAAAKVLLMRGANPKAVDNEGNTPLKLVSPSHSIGKDIVALLIEAHG 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01566 806 Gene3D - 285 439 IPR011993 -
Bva06g01566 806 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD1 1 803 - -
Bva06g01566 806 CDD BAR_SFC_plant 15 215 IPR035670 -
Bva06g01566 806 PANTHER CENTAURIN/ARF 1 803 IPR045258 GO:0005096
Bva06g01566 806 Pfam BAR domain of APPL family 6 233 - -
Bva06g01566 806 ProSiteProfiles Ankyrin repeat region circular profile. 746 778 - -
Bva06g01566 806 Gene3D Arfaptin homology (AH) domain/BAR domain 4 251 IPR027267 -
Bva06g01566 806 Gene3D - 659 805 IPR036770 -
Bva06g01566 806 ProSiteProfiles ARF GTPase-activating proteins domain profile. 498 643 IPR001164 GO:0005096
Bva06g01566 806 CDD PH_ACAP 295 432 - -
Bva06g01566 806 CDD ArfGap 501 630 - -
Bva06g01566 806 SUPERFAMILY ArfGap/RecO-like zinc finger 499 637 IPR037278 -
Bva06g01566 806 ProSiteProfiles PH domain profile. 292 428 IPR001849 -
Bva06g01566 806 ProSiteProfiles Ankyrin repeat profile. 713 745 IPR002110 GO:0005515
Bva06g01566 806 SUPERFAMILY Ankyrin repeat 711 804 IPR036770 -
Bva06g01566 806 PRINTS HIV Rev interacting protein signature 510 529 IPR001164 GO:0005096
Bva06g01566 806 PRINTS HIV Rev interacting protein signature 529 546 IPR001164 GO:0005096
Bva06g01566 806 PRINTS HIV Rev interacting protein signature 552 573 IPR001164 GO:0005096
Bva06g01566 806 Gene3D Arf GTPase activating protein 477 644 IPR038508 -
Bva06g01566 806 Coils Coil 118 138 - -
Bva06g01566 806 ProSiteProfiles Ankyrin repeat region circular profile. 713 744 - -
Bva06g01566 806 ProSiteProfiles Ankyrin repeat profile. 746 778 IPR002110 GO:0005515
Bva06g01566 806 SMART 5bar 2 218 IPR004148 GO:0005515|GO:0005737
Bva06g01566 806 SMART PH_update 293 430 IPR001849 -
Bva06g01566 806 Pfam PH domain 294 427 IPR001849 -
Bva06g01566 806 MobiDBLite consensus disorder prediction 682 701 - -
Bva06g01566 806 SUPERFAMILY BAR/IMD domain-like 6 315 IPR027267 -
Bva06g01566 806 SMART arf_gap_3 498 643 IPR001164 GO:0005096
Bva06g01566 806 Pfam Putative GTPase activating protein for Arf 501 637 IPR001164 GO:0005096
Bva06g01566 806 SUPERFAMILY PH domain-like 204 427 - -
Bva06g01566 806 Pfam Ankyrin repeats (many copies) 733 786 IPR002110 GO:0005515
Bva06g01566 806 SMART ANK_2a 713 742 IPR002110 GO:0005515
Bva06g01566 806 SMART ANK_2a 746 775 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01566 Bva-Chr6 11200728 11211265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01566 509 615 C2H2 Transcription Factor Family AT3G07940 42.056 6.49e-20 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01566 K12489 - gmx:100792517 1069.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01566 06 11200728 11211265 Bva05g00193 05 940398 950024 ECH
Bva06g01566 06 11200728 11211265 Bva06g01566 06 11200728 11211265 ECH