Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01560 ATGAACTGGCCAACATGGAAGACCATCATAACAACGGTGTTGCTTCTGCTGAGTTGCTCCTCGGAGGTTCGCTGTTTCTCTTCTCATGAAGATAGGATTGTTGGGCTTCCAGGACAACCCCACGTGAGCTTCCAACACTTCTCAGGATATGTCACAGTTGATGACAAGAAACAGAGAGCTCTGTTTTACTATTACGTTGAATCTGAAACCGATCCAATTTCAAAGCCTCTGGTCCTCTGGCTCAATGGAGgACCTGGTTGTTCTTCTCTGGGAGTAGGTGCATTCTCTGAGAATGGACCCTTTAGACCAAATGGGGAAGTTCTGATTTATAATGAGTATAGTTGGAACAGAGAAGCCAACATGTTGTATTTAGAGACACCAGCAGGAGTGGGGTTCTCTTATGCTAAAGGTAGCTCCTCTTTTAAGACAGTAAATGACGAGGCAACAGcCAGGGACAACCTCGTATTCTTGCAACGCTGGTTCGACAAGTTCCCACGATACAGGCACAGTGATCTGTTTCTAACAGGGGAAAGTTATGCAGGACACTATGTTCCCCAACTTGCAAAGCTCATGATTGAAATCAacaagaaggagaagaaattcAATCTTAAAGGCATAGCTTTGGGTAATCCAGTCCTAGAATACGCCACCGACTTCAATTCAAGGGCAGAGTTCTTCTGGTCTCACGGATTAATATCAGATTCAACTTACAAAATGTTCACCAGAGTGTGCAACTATTCGCGGTACGTTAGTGAATACTACAGAGACTCGGTTTCGCCTCTTTGTTCAAAGGTGATGGGTGAAGTCAGTAAAGAAACCAGTAAGTTTGTGGACAAATACGATGTCACCCTTGACGTGTGCATCTCATCGGTGCTTTCACAATCTAAAGTGTTTTGTCCTCAGACCCAACAAGCAAATGAGAGAATAGATGTATGTGTGGATGACAAAGTTACCAATTACCTAAACAGAAGAGATGTACAGAAGGCACTCCATGCCAGGCTTGTTGGAGTTCGCAAGTGGGATGTCTGCAGCAACATCTTGGACTATGATATGCGCAATCTGGAATTGCCCACACTCCCTATAGTCGGATCGCTTGTAAAAGCTGGAGTGCGAGTCTTAATTTACAGTGGAGATCAAGATTCTGTAATTCCATTGACTGGGAGCCGCAGCTTGGTTAATAAACTTGCAAGGCAGTTAGGACTTAATATAACAGTACCCTACAGAGTATGGTTTCAAGGACAGCAGGTTGGTGGGTGGACTCAAGTTTATGGCAATATGCTGTCATTTGCCACTGTTAGAGGTGCTTCCCATGAAGTTCCTTTCTCGCAGCCTGAGAGATCACTTGTGCTATTCAAGTCATTCTTGGAAGGCAGGCCTCTACCAGAGATTCTCTG 1394 0.439 MNWPTWKTIITTVLLLLSCSSEVRCFSSHEDRIVGLPGQPHVSFQHFSGYVTVDDKKQRALFYYYVESETDPISKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEVLIYNEYSWNREANMLYLETPAGVGFSYAKGSSSFKTVNDEATARDNLVFLQRWFDKFPRYRHSDLFLTGESYAGHYVPQLAKLMIEINKKEKKFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYKMFTRVCNYSRYVSEYYRDSVSPLCSKVMGEVSKETSKFVDKYDVTLDVCISSVLSQSKVFCPQTQQANERIDVCVDDKVTNYLNRRDVQKALHARLVGVRKWDVCSNILDYDMRNLELPTLPIVGSLVKAGVRVLIYSGDQDSVIPLTGSRSLVNKLARQLGLNITVPYRVWFQGQQVGGWTQVYGNMLSFATVRGASHEVPFSQPERSLVLFKSFLEGRPLPEIL 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01560 464 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Bva06g01560 464 PANTHER CARBOXYPEPTIDASE 25 462 - -
Bva06g01560 464 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Bva06g01560 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Bva06g01560 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Bva06g01560 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 427 440 IPR001563 GO:0004185|GO:0006508
Bva06g01560 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Bva06g01560 464 ProSitePatterns Serine carboxypeptidases, histidine active site. 427 444 IPR033124 GO:0004185
Bva06g01560 464 Gene3D alpha/beta hydrolase 28 289 IPR029058 -
Bva06g01560 464 SUPERFAMILY alpha/beta-Hydrolases 35 461 IPR029058 -
Bva06g01560 464 Gene3D - 358 457 - -
Bva06g01560 464 Gene3D - 312 348 - -
Bva06g01560 464 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 25 462 IPR001563 GO:0004185|GO:0006508
Bva06g01560 464 Pfam Serine carboxypeptidase 38 457 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01560 Bva-Chr6 11160311 11163219 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01560 320 460 Calmodulin-binding Proteins AT2G22960 29.078 3.80e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01560 K16297 - gmx:100795668 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01560 06 11160311 11163219 Bva06g01560 06 11160311 11163219 ECH