Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01551 ATGAAAGTACCGGAGACCGATCCTGTTACCTTTTCCATTCagcttctctcttctcttctcgaCGAAATCGCCATCATACATAACTTCAAAGGTAAATGGTCTCTAATCAGAGCCAAACTCGACGATCTTCAAACTCAACTCACCGATTTCTCCAACGAGTTCCCCAATTACTCTTCTAACCCTCTCTCCGTCGACCTTCTTCATTCCATTTCCCATACCCTCAACGATGCCCTTTCACTTGCCAAAGATTGCTCCTCCTCTAATTTATCCCAGGGCAAGCTCAAGACTCAGAGCGATATTGATTCTGTTTTAGCTAAGCTGGATCGTCATGTTAAGGATTGTGACATTCTCTTTAGAAGTGGCGTTCTGCAAGACGGCGCCATTTCAAGCTCGTCTAAGAGGGAGGCTGTGCGAGCCGAATCCAGGAACTTGATAACTCGTTTGCAAATTGGGGCTGCCGATTCTAGAATGTCGGCGATGGACTCCTTGTTGAGTTTGCTCCGAGAGGACGATAAGAATGTCATGATAGCTGTGGCACAGGGTGTAGTTCCAGTGCTTGTCCGCTTGCTGGATTCGATCTCTTCCGAGATGAAGGAGAAGACTGTTGCTGTCATCTCCAGGATTTCTATGGTGGATAGTAGCAAGCATGTTCTAATGGCTGAGGGTTTGTtacttttgaataatttgctTCGGGTCCTTGATTCTGGAAGTGGCTCTGCCAAGGAGAAAGCTTGTATTGCTTTACAAGCATTGAGTTTTTCGAAAGAAAATGCCAGGGCAATTGGATCTAGAGGTGGAATCTCATCTCTATTGGAGATATGCCTAGCCGGCACACCTGGTTCCCAAGCTTCCGCTGCAGGGGTTTTGAGAAATCTCGCAGTCTTTGGtgaaattagagaaaatttcGTTGAGGAAAATGCAATCTTTGTTCTTTTGGGGCTTGCCTCTTCCGGAACTATATTAGCCCAGGAAAATGCAATTGGTTGTTTGTCTAGTTTGATTTCTGATGACGAAGGTTTGAAGCTTTTGGTTGTTAAAGAAGGAGGAATTGAGTGTTTGAAGAATTTCTGGGACTCTGCTCCCGCAATTCGGAGTCTTGAAGTCGCTGTGGAATTGTTGAGGCAGTTGGCTTCTAATGCACCAGTTGCTGAAGTTCTTGTTTCTGAGGACTTCATACTGCGACTTGTGGGCCTGCTCAGTTGTGGGGTACTGGGAGTGAGAACTGCTGCAGCTCGAGCTGTTTGTGCTTTAGGGTTCAGCACGAAGACGAGGAAAGAGATTGGTGAATGTGGTTGCATTACCCCATTGATCAAGATGTTGGATGGTAAGGCTGTAGACGAGAAAGAAGCGGCCGCACAGGCGTTATCAGTACTCATGTTGTATGCCGGTAATAGAAGGATTTTCCGTAAAGACGAGAGGGGCGTAATATGTGCAGTTCAGCTTTTGGATCCTTCAATTCAGAATTTGGATAAGAAATACCCTGTCTCCTTGTTGGTCTCACTTGTGCATTCGAAGAAATGTAGGAAACAAATGATAGCAGCTGGTGCCACTGTACATACACAAAAACTTGTTGAGGTGGATGTTGAGGGGTCTAAGAAACTCTTGGAAAGCCTTGGTCGTGGTAAGATATGGGGAGTTTTTGCGAGACCCTA 1652 0.4443 MKVPETDPVTFSIQLLSSLLDEIAIIHNFKGKWSLIRAKLDDLQTQLTDFSNEFPNYSSNPLSVDLLHSISHTLNDALSLAKDCSSSNLSQGKLKTQSDIDSVLAKLDRHVKDCDILFRSGVLQDGAISSSSKREAVRAESRNLITRLQIGAADSRMSAMDSLLSLLREDDKNVMIAVAQGVVPVLVRLLDSISSEMKEKTVAVISRISMVDSSKHVLMAEGLLLLNNLLRVLDSGSGSAKEKACIALQALSFSKENARAIGSRGGISSLLEICLAGTPGSQASAAGVLRNLAVFGEIRENFVEENAIFVLLGLASSGTILAQENAIGCLSSLISDDEGLKLLVVKEGGIECLKNFWDSAPAIRSLEVAVELLRQLASNAPVAEVLVSEDFILRLVGLLSCGVLGVRTAAARAVCALGFSTKTRKEIGECGCITPLIKMLDGKAVDEKEAAAQALSVLMLYAGNRRIFRKDERGVICAVQLLDPSIQNLDKKYPVSLLVSLVHSKKCRKQMIAAGATVHTQKLVEVDVEGSKKLLESLGRGKIWGVFARP 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01551 550 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 548 - -
Bva06g01551 550 SMART arm_5 295 335 IPR000225 GO:0005515
Bva06g01551 550 SMART arm_5 254 294 IPR000225 GO:0005515
Bva06g01551 550 SMART arm_5 420 460 IPR000225 GO:0005515
Bva06g01551 550 SMART arm_5 170 210 IPR000225 GO:0005515
Bva06g01551 550 SMART arm_5 379 419 IPR000225 GO:0005515
Bva06g01551 550 SMART arm_5 336 378 IPR000225 GO:0005515
Bva06g01551 550 Pfam Armadillo/beta-catenin-like repeat 170 209 IPR000225 GO:0005515
Bva06g01551 550 SUPERFAMILY ARM repeat 143 488 IPR016024 -
Bva06g01551 550 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 181 223 IPR000225 GO:0005515
Bva06g01551 550 PANTHER ARMADILLO-TYPE FOLD PROTEIN-RELATED 1 548 - -
Bva06g01551 550 Gene3D - 79 364 IPR011989 -
Bva06g01551 550 Gene3D - 365 527 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01551 Bva-Chr6 11108145 11110315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01551 127 410 U-box Gene Family AT2G23140 27.875 3.44e-16 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01551 - - zju:107418090 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01551 06 11108145 11110315 Bva05g00206 05 1030275 1032334 ECH
Bva06g01551 06 11108145 11110315 Bva06g01551 06 11108145 11110315 ECH