Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01550 ATGGATGACGGCCGCCaacatgaaaatggaaggcatAAAATGGACTACTACAGAGGAGGACATTCCCCGTGGAGTATCACTCCCCAGCATCAAGTAAAGGAACCGAATGCTCTAGTCATGAATAAGAAGATTATGTCCATAATTGCTGAGAGAGATACTGCCATTCTAGAACGAAATGTGGCTTTATCTGAAAAAGATGAAGCATTGGCTGCTCGAGATGAGGCCCTTCGGCAGAGGGATGAAGCACTTGCTCAACGTGATAATGCATTAATGGAAAGGGATAATGCCCTTGCCGCCCTTCAAATTCGGGACAATGCTGTCAACTTCCCATTGGGTGCTGGAATTCAACGTGGATCGAAGCGGATGCACCATCTAAATAACTTATCAGACACCGCATATGGCACAAAGGATACACCAATAACTGACGCTTTTCCGGTGACTGTTCTAGCTTCTGAAGCTGTCAACTCCCATCAGGCTAAGAGAACGAAGGAAAATAAGTCGATTTCTTCGAAGGTATCCAAGCCACAAggcaaaggaaagaaagtcGGTGAGGATTTAAATAGGCAGGCATCTTCTGAAGGGACAAAAATCAAATCCGAGTGGGATAGGCAGGATTTTGGCTTGAATTTGGTTACATTTGATGAAACTACCATGCCAGCCCCAGTTTGCACATGTACTGGAGTACCGCGGCAATGCTACAAATGGGGCAATGGTGGATGGCAGTCATCTTGTTGTACCACCAACTTGTCAGTATATCCACTGCCACAACTTCCAAACAAGCGCCACGCCCGAGTTGGTGGTCGAAAGATGAGTGGAAGTGTCTTTACGAGACTGCTCAGTAGAGTGGCAGCACAAGGCCATGATTTGTCCATACCATTGGATCTCAAGGAATACTGGGCTAGACATGGAACTAATCGCTACATCACTATCAAGTA 935 0.4439 MDDGRQHENGRHKMDYYRGGHSPWSITPQHQVKEPNALVMNKKIMSIIAERDTAILERNVALSEKDEALAARDEALRQRDEALAQRDNALMERDNALAALQIRDNAVNFPLGAGIQRGSKRMHHLNNLSDTAYGTKDTPITDAFPVTVLASEAVNSHQAKRTKENKSISSKVSKPQGKGKKVGEDLNRQASSEGTKIKSEWDRQDFGLNLVTFDETTMPAPVCTCTGVPRQCYKWGNGGWQSSCCTTNLSVYPLPQLPNKRHARVGGRKMSGSVFTRLLSRVAAQGHDLSIPLDLKEYWARHGTNRYITIK 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01550 311 PANTHER PROTEIN BASIC PENTACYSTEINE4 1 311 - -
Bva06g01550 311 PANTHER - 1 311 IPR010409 -
Bva06g01550 311 SMART GAGA_bind_2 1 311 IPR010409 -
Bva06g01550 311 MobiDBLite consensus disorder prediction 155 198 - -
Bva06g01550 311 Pfam GAGA binding protein-like family 1 311 IPR010409 -
Bva06g01550 311 Coils Coil 65 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01550 Bva-Chr6 11100275 11103914 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01550 1 311 BBR or BPC Transcription factor family AT2G21240 60.064 1.99e-135 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Bva06g01550 GAGA_bind 4.4e-101 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01550 - - jre:108986984 546.199