Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01547 ATGGGTTGCGTGCTCGGAACGCCGGATGCCAGAGGCCGCCGGACGGATTCCGGAGCTCAGCACCGTCGTCGCAGTAGTCAACAGCACTCTGTTACCACCGGAGACAATGCCATTAGGGTTAGAAAGGAGGGGACGGCGAGGGAGAGGCAAAGGACTCGGCACACCGGCGACTTTCCCGGTTCTCTTCCGGCGCCTGAGCGCAGGAAACCTAGGCTTGATCCATGCGCTAAAACTCAGCAGGGTTGGCCGTCTTGGTTGATGGCTGTGGCTGGTGAAGCGATCGGAGATTGGACTCCTCGTCGCGCCAACACCTTCGAGAAGCTTGCTAAGATTGGGCAAGGCACTTACAGCAATGTATATAAAGCGAAAGACCTTCTTACTGGAAAGATAGTGGCTTTAAAGAAAGTTAGATTTGATAATTTGGAGCCAGAAAGTGTAAAGTTCATGGCAAGAGAGATTCTTGTTTTGAGGCGGCTTGATCACCCCAATGTCCTTAAACTTGAAGGCTTGGTTACTTCAAGAATGTCATGTAGTCTTTACTTGGTATTCGAGTATATGGAACACGATCTAGCTGGGCTTGCAGCTGGCCAAGGTGTAAAGTTCACTGAGCCCCAGGTCAAATGCTATATGAAGCAATTACTCTCTGGCCTTGAGCATTGCCACAGCCGTGGTGTCTTGCACCGTGATATCAAGGGTTCCAATCTCCTTATTGACAATGAAGGAATCCTTAAAATAGCAGATTTTGGACTGGCGACTTTTTTCGATCCTGAGCAAAAGCAGCCCATGACAAGCAGAGTTGTCACCCTTTGGTACCGGCCTCCTGAGCTTCTTCTTGGGGCCACCTCCTATGGTGTTGGCATTGACCTTTGGAGTGCTGGATGCATTTTGGCCGAGCTGCTTGCTGGGAAGCCAATCATGCCTGGCCGAACAGAGGTTGAACAACtacacaaaatatttaagcTGTGTGGCTCTCCAACTGAGGAATATTGGAAGAAATATAGATTGCCAAATGCGACACTTTTTAAGCCGCAACAACCATACAAGCGTTGCATATCTGAAAACTTCAAGGATTTCCCTCCTTCTTCATTACCTCTAATTGAAACTCTGCTTGCTATAGATCCTGATAATCGTGGCACTGCCTTGGCTGCTCTAAATAGTGAATTCTTCACCACTGAGCCCCACGCTTGCGAACCATCAAGTCTACCAAAATATCCTCCCAGCAAGGAACTGGATGTAAAATTGAGAGATGAAGAAGCGAGAAGGCAAAAGGTTCTAAGTGGGAAAACTAATGCAGTTGATGGTGCTAGAAAAGTCAGAGTACGTGAGCGTGGTAGGGCGATTCCAGCCCCTGAAGCCAATGCGGAGATGCAAACAAATCTAGACAGATGGAGAGTTGTGAACCATGCAAATGCAAAAAGCAAGAGCGAGAAATTCCCACCTCCTCATCAGGATGGAGCTGTCGGATATCCATTGGATGCATCGCACAGAGCACCTGTCTCATTTGGTGCCGTTGATGCTTCCTTCGGCTCGGCGATATTTAATTCAAAGCCTTCAGGATCTGTTAAAAGTCATGCTGCTGCAGGAACTCATAGAGGGAGGAAAACTAGTAAAACAGACTCCCAGACGGCATCATCATGGAAATTTGTGCGTGCATTCAAACCATCATCTATAGGCCTATCAATGGGTATTTTATTCAGGGATAAATG 1706 0.4754 MGCVLGTPDARGRRTDSGAQHRRRSSQQHSVTTGDNAIRVRKEGTARERQRTRHTGDFPGSLPAPERRKPRLDPCAKTQQGWPSWLMAVAGEAIGDWTPRRANTFEKLAKIGQGTYSNVYKAKDLLTGKIVALKKVRFDNLEPESVKFMAREILVLRRLDHPNVLKLEGLVTSRMSCSLYLVFEYMEHDLAGLAAGQGVKFTEPQVKCYMKQLLSGLEHCHSRGVLHRDIKGSNLLIDNEGILKIADFGLATFFDPEQKQPMTSRVVTLWYRPPELLLGATSYGVGIDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPTEEYWKKYRLPNATLFKPQQPYKRCISENFKDFPPSSLPLIETLLAIDPDNRGTALAALNSEFFTTEPHACEPSSLPKYPPSKELDVKLRDEEARRQKVLSGKTNAVDGARKVRVRERGRAIPAPEANAEMQTNLDRWRVVNHANAKSKSEKFPPPHQDGAVGYPLDASHRAPVSFGAVDASFGSAIFNSKPSGSVKSHAAAGTHRGRKTSKTDSQTASSWKFVRAFKPSSIGLSMGILFRDK 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01547 568 PANTHER CELL DIVISION PROTEIN KINASE 59 551 - -
Bva06g01547 568 SUPERFAMILY Protein kinase-like (PK-like) 99 394 IPR011009 -
Bva06g01547 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Bva06g01547 568 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 59 551 - -
Bva06g01547 568 ProSiteProfiles Protein kinase domain profile. 105 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01547 568 MobiDBLite consensus disorder prediction 517 543 - -
Bva06g01547 568 MobiDBLite consensus disorder prediction 1 78 - -
Bva06g01547 568 CDD STKc_CDK9_like 105 389 - -
Bva06g01547 568 Gene3D Phosphorylase Kinase; domain 1 92 187 - -
Bva06g01547 568 Gene3D Transferase(Phosphotransferase) domain 1 188 428 - -
Bva06g01547 568 SMART serkin_6 105 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01547 568 ProSitePatterns Protein kinases ATP-binding region signature. 111 134 IPR017441 GO:0005524
Bva06g01547 568 MobiDBLite consensus disorder prediction 40 55 - -
Bva06g01547 568 Pfam Protein kinase domain 105 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01547 Bva-Chr6 11091035 11095316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01547 97 424 Core Cell Cycle Gene Families AT5G10270 51.852 2.38e-116 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bva06g01547 Pkinase 1.1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01547 K08819 - gmx:100807756 980.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01547 06 11091035 11095316 Bva06g01547 06 11091035 11095316 ECH