Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva06g01547 | ATGGGTTGCGTGCTCGGAACGCCGGATGCCAGAGGCCGCCGGACGGATTCCGGAGCTCAGCACCGTCGTCGCAGTAGTCAACAGCACTCTGTTACCACCGGAGACAATGCCATTAGGGTTAGAAAGGAGGGGACGGCGAGGGAGAGGCAAAGGACTCGGCACACCGGCGACTTTCCCGGTTCTCTTCCGGCGCCTGAGCGCAGGAAACCTAGGCTTGATCCATGCGCTAAAACTCAGCAGGGTTGGCCGTCTTGGTTGATGGCTGTGGCTGGTGAAGCGATCGGAGATTGGACTCCTCGTCGCGCCAACACCTTCGAGAAGCTTGCTAAGATTGGGCAAGGCACTTACAGCAATGTATATAAAGCGAAAGACCTTCTTACTGGAAAGATAGTGGCTTTAAAGAAAGTTAGATTTGATAATTTGGAGCCAGAAAGTGTAAAGTTCATGGCAAGAGAGATTCTTGTTTTGAGGCGGCTTGATCACCCCAATGTCCTTAAACTTGAAGGCTTGGTTACTTCAAGAATGTCATGTAGTCTTTACTTGGTATTCGAGTATATGGAACACGATCTAGCTGGGCTTGCAGCTGGCCAAGGTGTAAAGTTCACTGAGCCCCAGGTCAAATGCTATATGAAGCAATTACTCTCTGGCCTTGAGCATTGCCACAGCCGTGGTGTCTTGCACCGTGATATCAAGGGTTCCAATCTCCTTATTGACAATGAAGGAATCCTTAAAATAGCAGATTTTGGACTGGCGACTTTTTTCGATCCTGAGCAAAAGCAGCCCATGACAAGCAGAGTTGTCACCCTTTGGTACCGGCCTCCTGAGCTTCTTCTTGGGGCCACCTCCTATGGTGTTGGCATTGACCTTTGGAGTGCTGGATGCATTTTGGCCGAGCTGCTTGCTGGGAAGCCAATCATGCCTGGCCGAACAGAGGTTGAACAACtacacaaaatatttaagcTGTGTGGCTCTCCAACTGAGGAATATTGGAAGAAATATAGATTGCCAAATGCGACACTTTTTAAGCCGCAACAACCATACAAGCGTTGCATATCTGAAAACTTCAAGGATTTCCCTCCTTCTTCATTACCTCTAATTGAAACTCTGCTTGCTATAGATCCTGATAATCGTGGCACTGCCTTGGCTGCTCTAAATAGTGAATTCTTCACCACTGAGCCCCACGCTTGCGAACCATCAAGTCTACCAAAATATCCTCCCAGCAAGGAACTGGATGTAAAATTGAGAGATGAAGAAGCGAGAAGGCAAAAGGTTCTAAGTGGGAAAACTAATGCAGTTGATGGTGCTAGAAAAGTCAGAGTACGTGAGCGTGGTAGGGCGATTCCAGCCCCTGAAGCCAATGCGGAGATGCAAACAAATCTAGACAGATGGAGAGTTGTGAACCATGCAAATGCAAAAAGCAAGAGCGAGAAATTCCCACCTCCTCATCAGGATGGAGCTGTCGGATATCCATTGGATGCATCGCACAGAGCACCTGTCTCATTTGGTGCCGTTGATGCTTCCTTCGGCTCGGCGATATTTAATTCAAAGCCTTCAGGATCTGTTAAAAGTCATGCTGCTGCAGGAACTCATAGAGGGAGGAAAACTAGTAAAACAGACTCCCAGACGGCATCATCATGGAAATTTGTGCGTGCATTCAAACCATCATCTATAGGCCTATCAATGGGTATTTTATTCAGGGATAAATG | 1706 | 0.4754 | MGCVLGTPDARGRRTDSGAQHRRRSSQQHSVTTGDNAIRVRKEGTARERQRTRHTGDFPGSLPAPERRKPRLDPCAKTQQGWPSWLMAVAGEAIGDWTPRRANTFEKLAKIGQGTYSNVYKAKDLLTGKIVALKKVRFDNLEPESVKFMAREILVLRRLDHPNVLKLEGLVTSRMSCSLYLVFEYMEHDLAGLAAGQGVKFTEPQVKCYMKQLLSGLEHCHSRGVLHRDIKGSNLLIDNEGILKIADFGLATFFDPEQKQPMTSRVVTLWYRPPELLLGATSYGVGIDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPTEEYWKKYRLPNATLFKPQQPYKRCISENFKDFPPSSLPLIETLLAIDPDNRGTALAALNSEFFTTEPHACEPSSLPKYPPSKELDVKLRDEEARRQKVLSGKTNAVDGARKVRVRERGRAIPAPEANAEMQTNLDRWRVVNHANAKSKSEKFPPPHQDGAVGYPLDASHRAPVSFGAVDASFGSAIFNSKPSGSVKSHAAAGTHRGRKTSKTDSQTASSWKFVRAFKPSSIGLSMGILFRDK | 568 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva06g01547 | 568 | PANTHER | CELL DIVISION PROTEIN KINASE | 59 | 551 | - | - | |
Bva06g01547 | 568 | SUPERFAMILY | Protein kinase-like (PK-like) | 99 | 394 | IPR011009 | - | |
Bva06g01547 | 568 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 225 | 237 | IPR008271 | GO:0004672|GO:0006468 | |
Bva06g01547 | 568 | PANTHER | SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED | 59 | 551 | - | - | |
Bva06g01547 | 568 | ProSiteProfiles | Protein kinase domain profile. | 105 | 389 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bva06g01547 | 568 | MobiDBLite | consensus disorder prediction | 517 | 543 | - | - | |
Bva06g01547 | 568 | MobiDBLite | consensus disorder prediction | 1 | 78 | - | - | |
Bva06g01547 | 568 | CDD | STKc_CDK9_like | 105 | 389 | - | - | |
Bva06g01547 | 568 | Gene3D | Phosphorylase Kinase; domain 1 | 92 | 187 | - | - | |
Bva06g01547 | 568 | Gene3D | Transferase(Phosphotransferase) domain 1 | 188 | 428 | - | - | |
Bva06g01547 | 568 | SMART | serkin_6 | 105 | 389 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bva06g01547 | 568 | ProSitePatterns | Protein kinases ATP-binding region signature. | 111 | 134 | IPR017441 | GO:0005524 | |
Bva06g01547 | 568 | MobiDBLite | consensus disorder prediction | 40 | 55 | - | - | |
Bva06g01547 | 568 | Pfam | Protein kinase domain | 105 | 389 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva06g01547 | Bva-Chr6 | 11091035 | 11095316 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva06g01547 | 97 | 424 | Core Cell Cycle Gene Families | AT5G10270 | 51.852 | 2.38e-116 | 353 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_CDK-CRK7-CDK9 | Bva06g01547 | Pkinase | 1.1e-67 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva06g01547 | K08819 | - | gmx:100807756 | 980.319 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva06g01547 | 06 | 11091035 | 11095316 | Bva06g01547 | 06 | 11091035 | 11095316 | ECH |