Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01544 ATGGacaagtttaattttgttagaaaTGGAGTGACAAGATTGCCTCCTGGTTTTCGTTTCCAGCCAACAGATGAAGAGCTTGTCTTTCAATACCTCAAATGCAAGATCTTTTCATGCCCACTTCCTGCTTCAATCATCCCCGACATCAACGTCTGCAAGTACGATCCTTGGGATTTCCCAGGTGGTTCGGATGAACAAGGGAAGTACTTTTTCAGCTACAAGGAGACAAAATATCGAAATGGTAATCGCATGAACAGAACAACCAACTCTGGCTATTGGAAAGCAACTGGGtcagacaaaaaaatttcatcttcaaGAGAAAACGACGTTGTAGGGATGAGAAAATCTCTGGTTTTTTACCAAGGGAAATCCCCAAATGGCTCCAGAACTGAGTGGGTCATGCATGAGTATCGCCTTGTCAGTGCAGAAAACCAGAATTACGCAAACGAGATAGGAGATTGGGTTCTGTGTCGCATATTcttgaagaaaagaagtgcagaaaatgTTGATAGGCCAAGTATACAGACTAATGAGCGAAACCTGCATGTTGGGGTGGCTCAACCAAGATACTTTGATTTTATGATGGTGCATAAGACAATTCCACGATCCAACCTTTCTCCTACATCGTCATCTTGTTCAAGTTCCAGTAGTATTACTGAGATGTCAGAGTACAATGAAACAAGTGGCTATACTGGACTTTA 701 0.3894 MDKFNFVRNGVTRLPPGFRFQPTDEELVFQYLKCKIFSCPLPASIIPDINVCKYDPWDFPGGSDEQGKYFFSYKETKYRNGNRMNRTTNSGYWKATGSDKKISSSRENDVVGMRKSLVFYQGKSPNGSRTEWVMHEYRLVSAENQNYANEIGDWVLCRIFLKKRSAENVDRPSIQTNERNLHVGVAQPRYFDFMMVHKTIPRSNLSPTSSSCSSSSSITEMSEYNETSGYTGL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01544 233 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
Bva06g01544 233 SUPERFAMILY NAC domain 9 162 IPR036093 GO:0003677|GO:0006355
Bva06g01544 233 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Bva06g01544 233 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 231 - -
Bva06g01544 233 Gene3D NAC domain 23 167 IPR036093 GO:0003677|GO:0006355
Bva06g01544 233 MobiDBLite consensus disorder prediction 203 233 - -
Bva06g01544 233 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01544 Bva-Chr6 11078150 11079564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01544 1 166 NAC Transcription Factor Family AT5G13180 62.651 2.42e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva06g01544 NAM 3.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01544 - - aprc:113868555 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00256 03 1558723 1560110 Bva06g01544 06 11078150 11079564 ECH
Bva04g01883 04 19276225 19277599 Bva06g01544 06 11078150 11079564 ECH
Bva06g01697 06 11890057 11891585 Bva06g01544 06 11078150 11079564 ECH
Bva05g00082 05 414594 416081 Bva06g01544 06 11078150 11079564 ECH
Bva06g01544 06 11078150 11079564 Bva06g01544 06 11078150 11079564 ECH