Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01533 ATGGACGCTGTGAAGCAGACATGCAAGAAGGTATGGAGGCGCTGCAGGAGATCCCATGCGGTTGCAAACTGCGGCGTATTAtcggagaagaagaagaaaagtcgGGTGGCTCCGGCTGGTTGCTTCTGTGTGGAGGTTGGACCAGACAGAAAAAGATTTGTAATGAAGATAAAGCATGCGAATCACCCATCGTTCAAGATACTGCTCGACGATGCCGAGGAGGAATACGGGTTTAAAAACGACGGCCCCATATGGCTTCCTTGTCATGTTGATTTATTCTGCGATGCATTGGAAGAGATGGGAATTAAGCACCGTCGACCATATCATGGGCTTTGCAGCAGCGGCCTGCACCTTTCCTA 359 0.4708 MDAVKQTCKKVWRRCRRSHAVANCGVLSEKKKKSRVAPAGCFCVEVGPDRKRFVMKIKHANHPSFKILLDDAEEEYGFKNDGPIWLPCHVDLFCDALEEMGIKHRRPYHGLCSSGLHLS 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01533 119 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 17 102 IPR003676 GO:0009733
Bva06g01533 119 PANTHER SMALL AUXIN-UP RNA-RELATED 17 102 - -
Bva06g01533 119 Pfam Auxin responsive protein 17 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01533 Bva-Chr6 11014257 11014616 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01533 38 97 Calmodulin-binding Proteins AT4G34750 51.667 2.20e-17 71.2