Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01510 ATGGAGAACAACCAGCAAGCCCAATCCTCCTCATTCCCACCTCAACCCACTGCTCCTGCTCCTTTCCACCACCTTCTCcaacagcaacagcagcaCCTTCAGATGTTCTGGAATTACCAGCGCCAGGAAATCGATCAGGTGAATGATTTCAAAAACCACCAGCTCCCTCTCGCGCGCATCAAGAAGATCATGAAGGCCGACGAAGACGTTCGCATGATCTCTGCCGAGGCACCCATATTGTTCGCCAAGGCCTGCGAGCTCTTCATTCTTGAACTTACCATACGATCTTGGCTCCACGCTGAGGAGAACAAGAGGAGGACTTTGCAGAAGAACGATATAGCCGCTGCTATCACCAGGACTGATATATTCGATTTTTTGGTCGATATTGTGCCCAGGGATGAGATTAAGGACGAGGCTGGCCTTGGTGGTATGGTGGGGACCACGGCAAGCGGCGTCCCATACTACTATCCTCCCATGGGGCAACCTGCTGGCCCTCCTGGTGGAATGATGATTGGACGGCCGGCGATGGATCCCACGGCGGTTTACGGCCAGCCTCCTTCACAGGCCTGGCAATCGGTGTGGCAACCCGCTGCTGAGGATGGCTCATACGGGAGCGGCGGTAGCAGTGGACAGGGTAACCTTGATGGTCAGAGGTATGAACTTGCATTTTCAGCCCTTAAAATGAGGATGCTTTGGTTCCTAAACATGTGTATCAGAATTGCATG 725 0.52 MENNQQAQSSSFPPQPTAPAPFHHLLQQQQQHLQMFWNYQRQEIDQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGTTASGVPYYYPPMGQPAGPPGGMMIGRPAMDPTAVYGQPPSQAWQSVWQPAAEDGSYGSGGSSGQGNLDGQRYELAFSALKMRMLWFLNMCIRIA 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01510 241 SUPERFAMILY Histone-fold 11 126 IPR009072 GO:0046982
Bva06g01510 241 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-4 1 217 - -
Bva06g01510 241 Gene3D Histone, subunit A 22 132 IPR009072 GO:0046982
Bva06g01510 241 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 217 - -
Bva06g01510 241 Pfam Core histone H2A/H2B/H3/H4 46 117 IPR007125 GO:0003677
Bva06g01510 241 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01510 Bva-Chr6 10909512 10910237 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01510 20 217 CCAAT-HAP5 Transcription Factor Family AT3G48590 87.745 7.23e-108 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bva06g01510 CBFD_NFYB_HMF 2.6e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01510 - - cmax:111500215 338.576