Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01502 ATGGCGTCTCTGCAACAGGGTCTTGCCTCGCTCCAATCTAATCACATTCATCCAACACAAACCCCGAGAAACTTCCACACCCATAAACCACTCCtcaatttttccttctttggcACCACTTTCCCTTCACTCAAACTGAAATTCGCCGGCGCCACCACATCCCGCCGATCCAATGGTGCCCTCGGAGCTAAAATGGTTGCAAGCGCCGCTGCTAGCTATGCTCTTGCCCTCGCCGATGTGGCCAAGGGCAACAACACCCTCGACGCCACAACCGCTGATATCGAGAAAATCGAGGAAATCTTCTCTGAGAAACAAGTGTtggatttttttgtcaatCCAACTGTAGAAAAcgaaaagaagcaaaagataATCGAGGAAATTGCGACTGCCTACAGCTTTCAGCCACATACCCGCAACTTCCTCAACATTTTAGTTGAAGCCAAGAGGATTGATCTAATCAATGAAATAACGAAGGAATTTGAATTCGTTTATAACAAGTTGACTGACACAGAGTTGGCAGTGGTGAGCTCGGTTGTGAAGTTGGAGTCGCAGCACTTGGCCCAGATCGCGAAGCAGGTGCAGAAGTTGACCGGAGCCAAAAATGTGAGAATCAAGACGGTGATTGAACCAAGTTTAGTGGCTGGCTTCACTATCAGGTATGGCAATACAGGATCTAAGTTGATTGACATGAGCGTCAAAAAGCAACTTGAAGAAATTGCTACTCAGCTTGATTTGGGTGATATCGAACTTGCAGTGTG 758 0.4433 MASLQQGLASLQSNHIHPTQTPRNFHTHKPLLNFSFFGTTFPSLKLKFAGATTSRRSNGALGAKMVASAAASYALALADVAKGNNTLDATTADIEKIEEIFSEKQVLDFFVNPTVENEKKQKIIEEIATAYSFQPHTRNFLNILVEAKRIDLINEITKEFEFVYNKLTDTELAVVSSVVKLESQHLAQIAKQVQKLTGAKNVRIKTVIEPSLVAGFTIRYGNTGSKLIDMSVKKQLEEIATQLDLGDIELAV 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01502 252 PANTHER ATP SYNTHASE-RELATED 29 252 - -
Bva06g01502 252 PANTHER ATP SYNTHASE DELTA CHAIN 29 252 IPR000711 GO:0015986|GO:0046933
Bva06g01502 252 Gene3D - 69 161 IPR026015 -
Bva06g01502 252 Pfam ATP synthase delta (OSCP) subunit 70 243 IPR000711 GO:0015986|GO:0046933
Bva06g01502 252 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 70 243 IPR000711 GO:0015986|GO:0046933
Bva06g01502 252 PRINTS ATP synthase delta subunit signature 200 215 IPR000711 GO:0015986|GO:0046933
Bva06g01502 252 PRINTS ATP synthase delta subunit signature 149 163 IPR000711 GO:0015986|GO:0046933
Bva06g01502 252 PRINTS ATP synthase delta subunit signature 138 149 IPR000711 GO:0015986|GO:0046933
Bva06g01502 252 PRINTS ATP synthase delta subunit signature 69 88 IPR000711 GO:0015986|GO:0046933
Bva06g01502 252 PRINTS ATP synthase delta subunit signature 218 236 IPR000711 GO:0015986|GO:0046933
Bva06g01502 252 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 67 168 IPR026015 -
Bva06g01502 252 Hamap ATP synthase subunit delta [atpD]. 65 245 IPR000711 GO:0015986|GO:0046933
Bva06g01502 252 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 202 221 IPR020781 GO:0015986|GO:0016020|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01502 Bva-Chr6 10861973 10863017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01502 1 251 Primary Pumps ATPases AT4G09650 60.079 4.87e-98 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01502 K02113 - gmx:100815063 318.931