Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01492 ATGGTTTCAACGAGACGTAGTGGATCTCTCTCTGGCAACAATACCAAAAGATCTTCTTCTTCAGAAGACAAGCCTCCATCACCGAAGCGTCAAAAGGTCGATAATGGTAGTGCGTCGGAGAAACCGATGCCGGCAGCGGAGAATTCTAAAGAACTGTGTACTTCCGAGCCGGCGGCTGATCCTGGAGAATGTGGGTCCGGCGATGCTCAGATCGCCGGAGCGGGTGCTGGTGATGGTCTGAGTTCTGGCAAGGGCGATACTGCGCCAGCTGTGGCTGTGGCGGCGCCGATCGCAGATGGGTCTTCGCCGACTTTGGTGGTTGATAAGCCCCCTCGTTCGTTCTCTTCGTGGAGTATATATCAGAAGCAAAATCCGAGTCTTGAGACTTCGCCATGGTGCAGGCTCCTGTCACAGTCTGCCCAGAATCCGACTGTTCCCATTTGTCTTCCGTGCTTCACAATTGGCTCTAGTAAAAATTGCAACTTTCCATTGAAGGATCAGTCTTTAAGTGGAAATTTATGCAAGATCAAGCAAACCCAGCATGAGGGGATTACCGTGGCTGTGCTAGAAAGTACTGGTAGCAAAGGATCTGTGCTTGTAAATGGGACAGTTGTCAAGAAGAATACCAGCCGTCCGCTTAACTCCGGTGATGAGTTGCTCTTTGGTTTTCTGGGAAATTATTCTTATATATTTCAGCAATTAAATACCGAGATTGCAATTAAGGGTGCAGAAGTTCAGAGTGGTGTTGGCAAATTTCTGCAGCTTGAAAGGAGAACTGGGGACCCTTCGGCTGTGGCTGGGGCTTCTATTTTGGCTTCTCTATCTAACTTCAGACAGGATAGTTCAAGACATAAACCTACATCTCAGACAGCCAATAAAGCTAACCAGGGTACTGATGTCTCTACTCACTCTGTACTTCATGATAGTACAGAAATTGAGATTGATGTCCCAGAAGGAGACTCAGCTCCAAACGCAGGGAGTGATAAAGCAGCTGATGTTGGAGCAAACGACAAGAATTCTCCCATCGATTGCGATCCAGATGTTGGCACAGAGGCAGGCAATGTAAAACTTTCTGGGGTATTGGAAGAAAGAAACGGGACAAGGGATACGCAGCCAACATCGACTTCAGGTATGTCTGTGCGCTGTGCAGTGTTTAAGGAAGATCTTCATGCTGCAATACTGGATGGAAGAGAAATAGAAGTGTCATTTGACAACTTCCCATACTATTTAAgTGAGAATACTAGAAACGTCTTGGTTGCGGCTTGCTTTATACATCTGAAGCATAAAGATCATGCAAAGTACACCACAGATCTTACTACCATAAACCCTCGTATATTGCTGTCTGGTCCTGCAGGTTCTGAAATATATCAGGAGATGTTAGCAAAAGCACTTGCTAATTACTTTGGAGCGAAATTGCTCATATTTGATAGTCATTTGCTTTTGGGTGGTTTATCTTCCAAGGAAGCTGAGTTACTCAAAGAAGGAATTAATGCTGAAAAATCCTGTGGCTGCACCAAGCAAAGTCCTACAATTACAGACTTGGGTAGGGGTATGGATCCATCAAGTAGTGAAACAGATACACCTAGCTCTTCTAATGCACCTACTCCAAATGGCCTTGAATCTCAACCTAAGTTGGAAACTGATGCGATACCCTCTTCCTCCGGGACAGCTAAAAATTGCTTGTTTAAATTAGGTGACAGGGTAAAATTTAGCTGTTCTTCTTCTGGGGGCTTATATCAGGCATCTTCTTCAAGGGGCCCACCTAATGGAAGCCGGGGGAAGGTTGCCTTAATTTTTGATGAGAATCCTTTGTCAAAAATTGGTGTAAGATTTGATAAACCTATTCCTGATGGAGTTGATCTTGGAGGTGCCTGTGAGACTGGTCAAGGATTTTTCTGCAATGTTACTGATCTTCGATTGGAAAATAGTACTGCAGAAGAATTGGACAAATTACTCATCAATACATTGTTTGAGgTTGTGTATAGTGAGAGCAGGAGTGcaccttttattttgttcatgaaAGATGCTGAAAAGTCTATTATAGGAAATGGAGATCCGTATTCATTTAAAAGCAGGCTTGAAAAGCTACCGGACAATGTGATTATAATAGGATCACACACACATACTGACAGTCGAAAAGAGaagTCACATCCTGGAGGTCTTCTTTTTACAAAGTTTGGCAGCAATCAGACTGCCCTTCTTGACTTGGCTTTCCCAgATATTGGAAGATTGCATGACAGGGGGAAGGAAGTCTCAAAGCCAAATAAAACTTTGACTAAGCTTTTTCCAAATAAAGTAACCATTCACATGCCACAGGATGAGGCACTTCTAACATCATGGAAGCAGCAATTGGATCGAGATGTTGAGACTTTGAAAATCAAAGGAAATTTGCATCACCTGCGGACAGTTTTGGGCCGTTGTGGGATGGAGTGTGAAGGACTTGAGACTTTGTGCATCAAGGACCATACACTTACAAATGAAAATGCAGAGAAGATAGTTGGTTGGGCATTGAGCCACCACCTGATGAAGAATTCTGAAGCAGATCCTGATGCAAAGCTTGTATTGTCTTGTGACAGCATCCAATATGGAATTGGGATCTTGCAAGCTATCCAGAATGAGTCCAAGAGCTTGAAGAAGTCTCTTAAGGATGTTGTAACAGAAAATGAGTTTGAGAAGAGGCTCTTGGCTGATGTTATTCCCCCTAGTGATATTGGTGTTACTTTTGACGATATTGGAGCTCTTGAAAATGTCAAGGATACCATGAAAGAGTTGGTGATGCTCCCTTTGCAGAGGCCTGAACTATTTTGCAAGGGGCAATTAACCaagCCTTGCAAGGGTATCCTATTGTTTGGTCCCCCTGGAACAGGTAAAACAATGCTCGCAAAGGCCATTGCTACTGAAGCTGGTGCAAACTTCATCAACATTTCTATGTCAAGCATTACATCTAAGTGGTTTGGCGAGGGTGAAAAATATGTGAAAGCTGTTTTCTCTTTGGCCAGTAAAATTGCTCCCAGTGTTATATTTGTTGATGAGGTTGACAGCATGTTGGGCCGGAGGGAAAATCCAGGGGAGCACGAGGCCATGcgaaagatgaaaaatgaattcatGGTGAATTGGGATGGCTTACGTACAAAGGACACTGAGCGAGTTCTTGTACTTGCTGCCACTAATAGGCCTTTTGACCTCGATGAGGCTGTCATCCGGAGGCTGCCACGAAGATTGATGGTAAATTTGCCAGATGCTCCAAATAgagcaaaaatattaaaagttatacTGGCAAAAGAGGACTTGTCTACTGACATTGATTTGGATGCAATTGCAAGTATGACGGATGGATATTCTGGAAGTGACCTGAAGAATCTGTGTGTAACTGCTGCACACCGaccaattaaagaaatattggaaaaggaaaaaaagGAGCGTGCTGCAGCTCTAGCAGAAGGTAGACCTGCTCCGGCATTAAGTGGTAGTGCTGATATCCGATCTTTAAACATGGAAGACTTCAAATACGCTCACAAACGGGTATGTGCAAGTGTTTCCTCTGAATCCGTAAACATGACTGAACTATTACAATGGAATGAACTATATGGCGAAGGTGGTtcgagaagaaagaaagaactcAGCTACTTCATGTG 3635 0.4264 MVSTRRSGSLSGNNTKRSSSSEDKPPSPKRQKVDNGSASEKPMPAAENSKELCTSEPAADPGECGSGDAQIAGAGAGDGLSSGKGDTAPAVAVAAPIADGSSPTLVVDKPPRSFSSWSIYQKQNPSLETSPWCRLLSQSAQNPTVPICLPCFTIGSSKNCNFPLKDQSLSGNLCKIKQTQHEGITVAVLESTGSKGSVLVNGTVVKKNTSRPLNSGDELLFGFLGNYSYIFQQLNTEIAIKGAEVQSGVGKFLQLERRTGDPSAVAGASILASLSNFRQDSSRHKPTSQTANKANQGTDVSTHSVLHDSTEIEIDVPEGDSAPNAGSDKAADVGANDKNSPIDCDPDVGTEAGNVLEERNGTRDTQPTSTSGMSVRCAVFKEDLHAAILDGREIEVSFDNFPYYLSENTRNVLVAACFIHLKHKDHAKYTTDLTTINPRILLSGPAGSEIYQEMLAKALANYFGAKLLIFDSHLLLGGLSSKEAELLKEGINAEKSCGCTKQSPTITDLGRGMDPSSSETDTPSSSNAPTPNGLESQPKLETDAIPSSSGTAKNCLFKLGDRVKFSCSSSGGLYQASSSRGPPNGSRGKVALIFDENPLSKIGVRFDKPIPDGVDLGGACETGQGFFCNVTDLRLENSTAEELDKLLINTLFEVVYSESRSAPFILFMKDAEKSIIGNGDPYSFKSRLEKLPDNVIIIGSHTHTDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDIGRLHDRGKEVSKPNKTLTKLFPNKVTIHMPQDEALLTSWKQQLDRDVETLKIKGNLHHLRTVLGRCGMECEGLETLCIKDHTLTNENAEKIVGWALSHHLMKNSEADPDAKLVLSCDSIQYGIGILQAIQNESKSLKKSLKDVVTENEFEKRLLADVIPPSDIGVTFDDIGALENVKDTMKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAIATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSTDIDLDAIASMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKERAAALAEGRPAPALSGSADIRSLNMEDFKYAHKRVCASVSSESVNMTELLQWNELYGEGGSRRKKELSYFM 1206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01492 1206 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 901 1181 IPR027417 -
Bva06g01492 1206 Gene3D - 1074 1168 - -
Bva06g01492 1206 MobiDBLite consensus disorder prediction 278 371 - -
Bva06g01492 1206 Coils Coil 862 882 - -
Bva06g01492 1206 Gene3D - 900 1181 IPR027417 -
Bva06g01492 1206 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 78 1206 - -
Bva06g01492 1206 MobiDBLite consensus disorder prediction 1 70 - -
Bva06g01492 1206 Pfam AAA+ lid domain 1095 1130 IPR041569 -
Bva06g01492 1206 MobiDBLite consensus disorder prediction 502 548 - -
Bva06g01492 1206 CDD AAA 940 1073 - -
Bva06g01492 1206 CDD FHA 132 232 IPR000253 GO:0005515
Bva06g01492 1206 Pfam FHA domain 153 222 IPR000253 GO:0005515
Bva06g01492 1206 ProSitePatterns AAA-protein family signature. 1045 1064 IPR003960 GO:0005524|GO:0016887
Bva06g01492 1206 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 78 1206 - -
Bva06g01492 1206 Gene3D - 131 239 - -
Bva06g01492 1206 MobiDBLite consensus disorder prediction 1 21 - -
Bva06g01492 1206 MobiDBLite consensus disorder prediction 278 305 - -
Bva06g01492 1206 SUPERFAMILY SMAD/FHA domain 119 232 IPR008984 GO:0005515
Bva06g01492 1206 SMART AAA_5 938 1075 IPR003593 -
Bva06g01492 1206 MobiDBLite consensus disorder prediction 22 36 - -
Bva06g01492 1206 Pfam ATPase family associated with various cellular activities (AAA) 942 1071 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01492 Bva-Chr6 10807834 10816239 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01492 901 1153 Calmodulin-binding Proteins AT3G56690 40.000 2.78e-42 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01492 - - aprc:113849024 1968.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01492 06 10807834 10816239 Bva06g01492 06 10807834 10816239 ECH