Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01490 ATGGAGGGCGTGATTGAGGTTGAGTCTGGTGCACACTTCTCTGGTTGGCGTCCCGATGGCATCATTGACCCTTCCACGACGTCGTCTTGTTCATTACCTCAATCATCACCATGCTCCACCGCCCCCAAGCAACCTTTTGTAAtcgGGGTCTCTGGTGGTACCGCATCAGGCAAGACGACGGTATGTGACTTGATTATTCAACAACTGCAAGATCATAGAGTTGTGCTCGTCAGTCAGGATTCATTCTACCGTGGTTTAACAGACGATGAAATGAAACACGTCCATGAGTATAATTTTGATCATCCTGACGCATTTGATACCGAGCAACTTGTAGAGTGTATCACCAAACTCAAATCTGGAGAGTCTGTTCAGGTTccaatatatgattttaagcACCACCGTCGGTGTTCTGACAATTTCCGGCAGGTCAATGCATCTGAGGTAATCATTTTGGAGGGTATATTGGTTTTTCATGAACAACGTGTCCGCAACATGatgaatatgaaattatttgttgatGCAGATGCTGATGTAAGGCTTGCTCGTAGAATAAGACGTGATACTGTTGAGAGAGGTAGAGATGTACACTCTGTTCTGGAACAGTACGCTAAATTTGTGAAGCCTGCCTTCGATGATTTTATTCTTCCATCCAAAAAGTACGCTGACATCATTATACCTCGTGGAGGAGAGAATCGTGTGGCAGTTGACTTGATTGTTCAACACATCCGCACTAAGCTTGGCCAACATAACCTCTGCAAAATATATCCAAATTTGAATGTTATCCACTCTACGTTCCAGATTAGAGGCATGCACACTCTTATCCGTGACAGGGAAATATCAAagcatgattttattttttattcagatCGGCTAATTCGTCTGGTAGTGGAACATGGTCTTGGCTACTTGCCATTTACAGAGAAGCAGGTTATCACACCGACAGGATCAATTTACACTGGAGTAGATTTTTGTAAGAAATTGTGTGGAGTATCCATTATTCGAAGTGGTGAAAGCATGGAGAATGCGCTGCGTGCGTGCtgtaaaggaataaaaataggaaaaatccTTGTCCACCGCGAAGGTGACGAGACGCagCTAATATATGAGAAGCTCCCTAAAGACATTTCAGAGAGACATGTTCTCCTTATGGACCCGGTACTTGGTACAGGTAACACGGCCAGCCAAGCTATTGAACTTCTCATACAGAAGGGAGTTCCGGAGTCCCGGATAATATTCCTCAACCTTATCTCTGCTCCCGAGGGAATACATGGCGTCTGTAAACGCTTTCCGTACCTCAAAATCGTCACATCAGAAATTGAAGTTGGATTAAACGACGAGTTCCGTGTCATACCAGGGTTGGGAGAATTCGGGGAACGCTATTTTGGTACGGACGACTCTTA 1400 0.4229 MEGVIEVESGAHFSGWRPDGIIDPSTTSSCSLPQSSPCSTAPKQPFVIGVSGGTASGKTTVCDLIIQQLQDHRVVLVSQDSFYRGLTDDEMKHVHEYNFDHPDAFDTEQLVECITKLKSGESVQVPIYDFKHHRRCSDNFRQVNASEVIILEGILVFHEQRVRNMMNMKLFVDADADVRLARRIRRDTVERGRDVHSVLEQYAKFVKPAFDDFILPSKKYADIIIPRGGENRVAVDLIVQHIRTKLGQHNLCKIYPNLNVIHSTFQIRGMHTLIRDREISKHDFIFYSDRLIRLVVEHGLGYLPFTEKQVITPTGSIYTGVDFCKKLCGVSIIRSGESMENALRACCKGIKIGKILVHREGDETQLIYEKLPKDISERHVLLMDPVLGTGNTASQAIELLIQKGVPESRIIFLNLISAPEGIHGVCKRFPYLKIVTSEIEVGLNDEFRVIPGLGEFGERYFGTDDS 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01490 466 Pfam Phosphoribulokinase / Uridine kinase family 47 233 IPR006083 GO:0005524|GO:0016301
Bva06g01490 466 PANTHER URIDINE KINASE 19 462 - -
Bva06g01490 466 CDD PRTases_typeI 322 436 IPR000836 -
Bva06g01490 466 CDD UMPK 47 245 IPR000764 -
Bva06g01490 466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 238 IPR027417 -
Bva06g01490 466 Pfam Uracil phosphoribosyltransferase 263 463 - -
Bva06g01490 466 Gene3D - 41 248 IPR027417 -
Bva06g01490 466 SUPERFAMILY PRTase-like 248 464 IPR029057 -
Bva06g01490 466 PANTHER URIDINE KINASE 19 462 - -
Bva06g01490 466 PRINTS Uridine kinase signature 177 187 - -
Bva06g01490 466 PRINTS Uridine kinase signature 213 226 - -
Bva06g01490 466 PRINTS Uridine kinase signature 191 202 - -
Bva06g01490 466 PRINTS Uridine kinase signature 45 62 - -
Bva06g01490 466 PRINTS Uridine kinase signature 75 86 - -
Bva06g01490 466 PRINTS Uridine kinase signature 120 135 - -
Bva06g01490 466 Gene3D - 249 463 IPR029057 -
Bva06g01490 466 TIGRFAM udk: uridine kinase 44 245 IPR000764 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01490 Bva-Chr6 10794418 10799869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01490 1 465 PRT Gene Family AT5G40870 77.941 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01490 K00876 - gmx:100816209 803.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01490 06 10794418 10799869 Bva03g00768 03 4589813 4597753 ECH
Bva06g01490 06 10794418 10799869 Bva06g01490 06 10794418 10799869 ECH