Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01487 ATGGCTGCTTCTAGTTATCTTTCATTGTGTCCGTACAGCCTGTGTTGCCGCCCTAACCCAAGAAGGCGTTCATTTTTGTGCTCGGGTCGCTCTTCCGTGGTCATTGCTACTGATGTGTCTAAAGCACCCCGCAAAAGATCAAGAAGAGCAGAAGGTCCTAAAAAGAGCATGGAAGATTCTGTTCAACGCAGGATGGAACAATTTTATGAAGGCTCTGATGGACCACCCCTCCGAGTTCTTCCTATTGGCGGTCTGGGTGAAATTGGGATGAATTGCATGCTTGTCGGGAACCATGACCGCTATATACTCATTGATGCTGGTGTCATGTTTCCAGACTATGATGAGCTAGGAGTCCAAAAGATTATACCTGATACTacatttataagaaaatggaGGCACAAAATTGAAGCAGTTATTATAACGCATGGTCATGAAGATCATATCGGTGCGTTGCCTTGGGTCATCCCTGCGTTGGATTCCCTTACACCGATTTTTGCATCTTCCTTTACAATGGAGCTTATTAAAAGGCGTCTAAAAGAGCAtggtatttatttatcatcaagacttaaaatatttagaacaaggaagaaatttgtGGCTGGGCCATTTGAAGTAGAGCCAATCAGGGTGACCCACTCTATTCCTGATTGTTGTGGATTAGTTCTTCGCTGTTCTGATGGTACTATCCTTCATACAGGGGATTGGAAGATTGATGAATCGCCATTAGATGGGAAAGTCTTTGACCGTGAAGCGTTAGAGGAACTTTCTAAAGAAGGAGTAACGTTGatGATGAGTGATTCAACAAATGTACTCTCACCTGGAAGAACAACCAGTGAATCTGTTGTGGCAGATGCACTATTGAGGCATATTTCAGCTGTTAAAGGAAGAGTCATCACAACCCAGTTTGCATCAAATATCCATCGTCTTGGAAGTGTGAAAGCTGCTGCTGACTTAACTGGTAGAAAGTTGGTATTTGTGGGCATGTCTCTAAGGACATATCTAGATGCAGCTTGGAAGGATGGAAAAGCACCAATTGATCCATCCACCCTGGTGAAGGTGGAGGATATTGATGGTTATGCTCCAAAGGACCTGCTAATTGTGACAACTGGTTCTCAAGCAGAACCACGTGCTGCCTTGAATCTTGCATCATATGGAAATAGCCACTCTTTCAAACTTACCAACGAAGATGTAATTTTGTATTCAGCAAAGGTTATCCCTGGTAACGAGTCTCGTGTGATGAAAATGCTAAATCGCATATCAGAGATTGGATCGACAATAATTATGGGGAAGAATGAATGTTTACACACCTCTGGTCATGGGTACCGCGGAgaattgGAAGAAGTACTTAAAATAGTGAAGCCACAACATTTTCTTCCCATACATGGAGaacttttgtttcttaagGAGCATGAATTACTTGGGAAATCAACTGGCATTCGACATACTGCCGTTATTAAAAATGGAGAGATGCTTGGTGTTTCACATTTGAGAAATAGAAGGGTGCTTTCTAATGGTTTCATCTCCCTTGGAAAAGAGAATTTGCAGCTGAAGTATAGTGATGGGGACAAGGCATTTGGTACATCAAGTGAACTCTTCATTGATGAAAGGTTGAGAATTGCGTTAGATGGCATTATTTTGGTCAGCATGGAAATATTCCGCCCTCAAAATTTAGACAGTTTGGTCGAAAATACCTTAAAAGGAAAGATAAGAATTACCACAAGATGCCTATGGCTTGATGATGGGAAGCTGTTGGATGCACTTCATAAAGTTGCTCATGCTGCCCTTTCAAGCTGCCCTGTAAACTGTCCATTGGCTCACACGGAAAGAACCGTGTCTGAGGTATTAAGGAAGATGGTGAGGAAGTATAGTGGTAAACGGCCTGAAGTTATTGCCATTGCCACAGAAAACCCTGCAGCTGTTCTTGCTGATGAGGTTAACACAAAGCTGTCTGGCAAATCCAATGTAGGACCTGGGATATCatcattgagaaaattaatggaTGGACATATAGAGGAAAATCAGTCCAAGAAAATGCAAGTGAAAGGAGGACCAATGCCAGATGATGGCATTGATGTTGAAGGACTGCTACCTGAGGAAGACACTGCTACTTCTAGTAGTGATGGTGCTGTCGGTGATTCAGAGGATTCAGATGAATTTTGGAAATCATTCATTAAATCTTCACCTGTTGAGAAGTCTATTAAATCTAACAATGGTTATGTTCCACGGAAGGAACAGAGCTCCCGGCTGAAGAAAGATGATGCGGAAGACACAGAAGAAGATAAATCTGAAAGCACGTCATCTTCTGAACCCAAATCTTCAAAGCtattgaagagaaataaatggaAACCTGAGGAAGTGAAGAGGCTGATTGGTATGCGTGGGGATCTGCAcgaaaaatttcaagttttgaaGGGAAGAATGGCCCTCTGGGAAGAGATTTCTCAGAACTTGTTGGCTGATGGGATCGAGAGAAGTCCAGCGCAGTGTAAATCATTGTGGACATCTTTGTTACATAAATACGAGGAGATCAAGAATGGGAAGAAAGGCAAGAAAAGTTGGCCGTATCTTGAGGACATGGATAGGATTCTATCTGATAAAGAGGCACTGGCaacaaaatg 2618 0.4057 MAASSYLSLCPYSLCCRPNPRRRSFLCSGRSSVVIATDVSKAPRKRSRRAEGPKKSMEDSVQRRMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPDYDELGVQKIIPDTTFIRKWRHKIEAVIITHGHEDHIGALPWVIPALDSLTPIFASSFTMELIKRRLKEHGIYLSSRLKIFRTRKKFVAGPFEVEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDESPLDGKVFDREALEELSKEGVTLMMSDSTNVLSPGRTTSESVVADALLRHISAVKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLDAAWKDGKAPIDPSTLVKVEDIDGYAPKDLLIVTTGSQAEPRAALNLASYGNSHSFKLTNEDVILYSAKVIPGNESRVMKMLNRISEIGSTIIMGKNECLHTSGHGYRGELEEVLKIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTAVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQLKYSDGDKAFGTSSELFIDERLRIALDGIILVSMEIFRPQNLDSLVENTLKGKIRITTRCLWLDDGKLLDALHKVAHAALSSCPVNCPLAHTERTVSEVLRKMVRKYSGKRPEVIAIATENPAAVLADEVNTKLSGKSNVGPGISSLRKLMDGHIEENQSKKMQVKGGPMPDDGIDVEGLLPEEDTATSSSDGAVGDSEDSDEFWKSFIKSSPVEKSIKSNNGYVPRKEQSSRLKKDDAEDTEEDKSESTSSSEPKSSKLLKRNKWKPEEVKRLIGMRGDLHEKFQVLKGRMALWEEISQNLLADGIERSPAQCKSLWTSLLHKYEEIKNGKKGKKSWPYLEDMDRILSDKEALATK 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01487 872 Gene3D - 81 493 IPR036866 -
Bva06g01487 872 MobiDBLite consensus disorder prediction 674 694 - -
Bva06g01487 872 PANTHER RIBONUCLEASE J 1 872 - -
Bva06g01487 872 MobiDBLite consensus disorder prediction 38 60 - -
Bva06g01487 872 MobiDBLite consensus disorder prediction 41 60 - -
Bva06g01487 872 Gene3D - 781 842 - -
Bva06g01487 872 Pfam Myb/SANT-like DNA-binding domain 778 862 IPR044822 -
Bva06g01487 872 MobiDBLite consensus disorder prediction 744 778 - -
Bva06g01487 872 Pfam Beta-lactamase superfamily domain 100 236 IPR001279 -
Bva06g01487 872 ProSiteProfiles Myb-like domain profile. 773 837 IPR001005 -
Bva06g01487 872 MobiDBLite consensus disorder prediction 732 778 - -
Bva06g01487 872 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 433 471 IPR011108 -
Bva06g01487 872 SUPERFAMILY Metallo-hydrolase/oxidoreductase 77 491 IPR036866 -
Bva06g01487 872 SMART Lactamase_B_5a 89 286 IPR001279 -
Bva06g01487 872 CDD GT1 779 844 - -
Bva06g01487 872 PANTHER RNA-METABOLISING METALLO-BETA-LACTAMASE 1 872 - -
Bva06g01487 872 CDD RNaseJ_MBL-fold 80 491 - -
Bva06g01487 872 Gene3D - 278 428 IPR042173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01487 Bva-Chr6 10777934 10786820 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01487 780 866 Trihelix Transcription Factor Family AT2G38250 33.708 1.86e-10 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva06g01487 Lactamase_B_2 7.7e-10 CL0381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01487 - - gmx:100814619 1401.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01487 06 10777934 10786820 Bva06g01487 06 10777934 10786820 ECH