Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01470 ATGCCTTCGCCTCTTTATAGTTCCTTCAAGGATGATTATGGTGATGAAAATCAAGAGATTGGCCTTGATCTCCATGTTTCAGCAATGGGTTACGCCTATCCTCTTTTGCCAATCCTTGAAAGCAGTGCTTCTAATTggcttttccctttttctgaTGAAACCACAAGAGATAGCAAAAGGATCAGGAAAAGCACAAGTATCCCTCATTTCCTTGTTGGAAACTATAGTGGCTCTTCAAGCAGTGGAAGTGGAAGTGGCAGGGATGGCTATAGTGGCATTGGAATGAGCCGCTGCAGCAGCATCAAAAGTGTGAACAGCTTGCCAAGGCTCCATTTCAGAGATTACATATGGACTTACACACAGAGATATCTTGCTGCTGAGGCTGTTGAAGAGGCAGCAGAAGATATGATCAATAGTTCTGAAGGGAATGTAGCCGAAGAAGAAGGAAGTGCTGATGGGATAAGGCTTGTTCAGCTTCTGATTTCTTGTGCTGAGGCTGTGGCTTGTCGTGACAAATCACATGCTTCTGTTTTACTCTCTGAACTTAGAGCCAATGCTTTGGTGTTTGGATCCTCATTCCAGCGCGTTGCTTCTTGTTTTGTCCAAGGCCTTGCTGACCGGCTTGCTCTAATACAACCAGTTGGAGCTGTGGGAGTTGTAGATCCCATGATGAATATTATGGATGCAGCCTcagaaaaaatggaagaagctTTTAGTTTGGTTTATGAGATTTGCCCACATATTCAATTTGGACACTTTGTGGCAAACTCAACAATATTGGAAGCCTTTGAGGGAAAGAGTTTTGTCCATGTGGTGGACCTGGGTATGACCCTTGGTCTTCCACATGGTCACCAATGGCGGGGACTGATCCAGAGCCTAGCTAACCGTTCTGGCCAACCAGTTCGACGCCTTCGCATAACTGGTGTTGGCCTTTGCATTGAAAGACTCAACATTATTGGCGAACAACTCCAAGCTTATGCAAATAACATGGGAATCGATTTTGAGTTCTCTGTGGTGCAAAAGAATCTAGAGAATTTGCAGCCTGAAGACATTAAAATCGAAGAAGGAGAGGTTCTAGTAGTCAACAGCATTCTTCAGTTGCACTGCGTGGTCAAAGAAAGTCGTGGGGCTTTGAATTCAGTGTTACAGATGATTCATGGACTTTCACCAAAAGTGCTAGTTATGGTTGAGCAGGACTCAAGCCACAATGGACCCTTTTTCCTCGGAAGGTTTATGGAAGCACTGCATTATTACTCTGCTATTTTTGACTCCTTAGATGCTATGTTGCCTAAATATGACACTAAGCGGGCTAAGATAGAGCAGTTTTTCTTTGGTGAGGAGATAAAGAACATTGTGAGCTGTGAGGGACCAGCAAGGGTGGAAAGGCATGAGAGAGTGGACCAGTGGCGCAGGAGAATGAGTAGGGCTGGGTTTCAAGCCGCACCTATGAAGATGGTGGCTCAGGCCAAGCAGTGGCTTAACAAGAATAAGGTTTGTGATGGCTATACCGTTGTGGAAGAGAAAGGATGCTTGGTGCTTGGTTGGAAGTCTAAGCCAATAGTTGCAGCTTCTTGCTGGAAATGCTG 1586 0.4401 MPSPLYSSFKDDYGDENQEIGLDLHVSAMGYAYPLLPILESSASNWLFPFSDETTRDSKRIRKSTSIPHFLVGNYSGSSSSGSGSGRDGYSGIGMSRCSSIKSVNSLPRLHFRDYIWTYTQRYLAAEAVEEAAEDMINSSEGNVAEEEGSADGIRLVQLLISCAEAVACRDKSHASVLLSELRANALVFGSSFQRVASCFVQGLADRLALIQPVGAVGVVDPMMNIMDAASEKMEEAFSLVYEICPHIQFGHFVANSTILEAFEGKSFVHVVDLGMTLGLPHGHQWRGLIQSLANRSGQPVRRLRITGVGLCIERLNIIGEQLQAYANNMGIDFEFSVVQKNLENLQPEDIKIEEGEVLVVNSILQLHCVVKESRGALNSVLQMIHGLSPKVLVMVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFFFGEEIKNIVSCEGPARVERHERVDQWRRRMSRAGFQAAPMKMVAQAKQWLNKNKVCDGYTVVEEKGCLVLGWKSKPIVAASCWKC 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01470 528 Pfam GRAS domain family 156 527 IPR005202 -
Bva06g01470 528 PANTHER DELLA PROTEIN RGL1-LIKE 58 527 - -
Bva06g01470 528 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 58 527 IPR005202 -
Bva06g01470 528 ProSiteProfiles GRAS family profile. 147 527 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01470 Bva-Chr6 10701170 10702756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01470 139 528 GRAS Transcription Factor Family AT1G66350 37.563 7.83e-81 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva06g01470 GRAS 1.6e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01470 - - rcu:8266360 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01470 06 10701170 10702756 Bva05g00279 05 1366187 1368532 ECH
Bva06g01470 06 10701170 10702756 Bva06g01470 06 10701170 10702756 ECH