Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01461 ATGAAAGGCCGCCGGGTACACGTGTGTGCGGAGTGTACCCAGAAATGTCTCTTGTTTCacgggaaaaagaaaaactctttaCCTCTagtctcttctttcttcaaggtCATGATTGGTGACGGTTTTTCCAGAGTATTGTATCTTCCTCCTAAATTTTGTTCTTCAGTGTCAGCCTTGGTTGATAGAAAAGTTATTCTTGAGGATTCAAGCGAGCAGCAATGGGAGGTAACATTGTCAATTGTCAACGATTCTTTGGCTTTTCATGAAGGGTGGAATACATTTTCATTGGAGCATGGGCTTAAAGTTGGAGACTTTCTGGTATTCTATTACATCAAGGGATCACACTTCATCGTTAACATCTATGATAGATCTGGGTGTGAAAAGTTGGATTTTGCGAAACATAGAAATCTAAAGAAAAGAGGTCGAAAGAGAAAGGGCTCCGCTGCTAGAGGTGACTCATATGGCATGAATGCAGAAGGCATGTTAATTAGGGAATGTTCAAGTGTCTCAATTGTGCCTGACTCGGTTGTGCCAGAAACACAAAGCCAGCATAAGGTGATTGATGTTGAAGGACCCTTGATTGTATGTGATTCAAATGTGCTGAAAACAAGAAGCCTACACCTGGGAGTGGATGCTGAAGCACCACAAAATAACGTAAAGAATACTTCAGAAGATGATAATAGCAAGGGAAGGAATCAGTCTGTGTCCAAATTAGAACACTTTGAAGACCCATGTTACATGATAGACCGAGAGTTTGGAggcaaagaaagagaggataGGATCCCTTTCTTTGACGTGCTTACCTGTGAAATATGGAACAACTCTGGTGTTGATAGGACTGTCAAAACTACAACCAGTGATGCAGAAGTTCctcattttgataataaatctCATGCAtctcaaaatgaagagagcCTATGTCACAATGATCTTTTGCATGGAGGGATATTGGGTGGTGTAGCGCCTTCAGAGGCGATTGACTTTGACTTGACTGCAATAAATGATTCTTTTGAAGACATGGCTTATGCCCGTGTTGGACGTTCTTACAGACACCAGACTTCTAAGCATCATTTAACCTCATCTATTGAGAAGGAAAGAACTAGAGAAAACAAATCCAGTATTTTCAACTGTGAAGTTGAAACCGTCCAGTTTGCCGAGGGAATAGTTAAGGAAGAGATTGAGGACATGGCTCCAGATGCGTGCAGTTACAAGGGATTGTCGAAGGTCATTGAGGGAGGGACGGGTCAGAGTTCTCACGCAACCACCAAAGATCATGATGGTGTTCTTCAAGTGGTGAAAGCTGAACCTGTGGAGGACTCTTGGTATCAGTTCAAAACGACATCCACATCCACTGCCTCCCGTGTGGTGCCACCTGCTAATGATTTGCTCGAGTTGCATCCGGGTAAGAGTAAGAGTGCAGACGATGGTTGTGCTCCTACGTG 1442 0.4057 MKGRRVHVCAECTQKCLLFHGKKKNSLPLVSSFFKVMIGDGFSRVLYLPPKFCSSVSALVDRKVILEDSSEQQWEVTLSIVNDSLAFHEGWNTFSLEHGLKVGDFLVFYYIKGSHFIVNIYDRSGCEKLDFAKHRNLKKRGRKRKGSAARGDSYGMNAEGMLIRECSSVSIVPDSVVPETQSQHKVIDVEGPLIVCDSNVLKTRSLHLGVDAEAPQNNVKNTSEDDNSKGRNQSVSKLEHFEDPCYMIDREFGGKEREDRIPFFDVLTCEIWNNSGVDRTVKTTTSDAEVPHFDNKSHASQNEESLCHNDLLHGGILGGVAPSEAIDFDLTAINDSFEDMAYARVGRSYRHQTSKHHLTSSIEKERTRENKSSIFNCEVETVQFAEGIVKEEIEDMAPDACSYKGLSKVIEGGTGQSSHATTKDHDGVLQVVKAEPVEDSWYQFKTTSTSTASRVVPPANDLLELHPGKSKSADDGCAPT 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01461 480 MobiDBLite consensus disorder prediction 448 480 - -
Bva06g01461 480 ProSiteProfiles B3 DNA-binding domain profile. 31 124 IPR003340 GO:0003677
Bva06g01461 480 SMART B3_2 33 124 IPR003340 GO:0003677
Bva06g01461 480 MobiDBLite consensus disorder prediction 212 236 - -
Bva06g01461 480 Gene3D - 30 126 IPR015300 -
Bva06g01461 480 CDD B3_DNA 32 122 IPR003340 GO:0003677
Bva06g01461 480 SUPERFAMILY DNA-binding pseudobarrel domain 31 126 IPR015300 -
Bva06g01461 480 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 8 153 IPR044837 -
Bva06g01461 480 Pfam B3 DNA binding domain 33 123 IPR003340 GO:0003677
Bva06g01461 480 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS02G0598200-LIKE 8 153 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01461 30 127 B3 DNA Binding Superfamily AT4G01580 30.303 2.62e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bva06g01461 B3 9.6e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01461 - - lang:109340743 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01461 06 10667624 10670808 Bva06g01461 06 10667624 10670808 ECH