Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01460 ATGTTGGATTACTACCAAATGATTGATGCAAGGCCCTCTTTCCAAGATTCTCTCAAGGCACTCGAGGCTGATATTCAGCATGCCAATATGCTAGCAGCTTCAATTCCTATGGATAGAGGCTGGGCTTGTCTTCAAATGAAGTTAGTTTACAATCACTTTGCACCAGCATTCTTGTTCTTGCTCCGATGGTTGGATTGCTCATGTTCTTGTCTACATTCGAGTTATTTGAATCTTTTCCACATTATTGTATATAAGGTGCACTCAAATCGGAAGCCAACTACATCTTCTTATGGAAGGAAAGCAACCATCAGGGAATTCTACAGTGTTATACTACCTTCTCTTCAGCGCCTTCATGCTGATTCATTAGATGTTAATATTTCTGAAGAAAAAAGTCATAGCTTCCAGATGGTTATCAGTAGAAATGTTGAGGACAAGAGCAAGCCATCAGACGTTGACTtgcagagagaaaatgagtgTGGCATCTGCTTAGAGCCTTGCACCAAAATGGTTTTGCCGAACTGCTGCCATGCTATGTGTGTAAATTGCTACCGTGACTGGAAAGCAAGGTCAGAATCATGCCCATTTTGCCGTGGAAGTTTCAAGAGAGTTAACTCGGGAGATTTGTGGGTTTTAACATGCAGTAGTGATGTGATTGACATGCAAACTGTGTTTAGAGAAGATATCCTGCGTCTCTATCTGTTTATAAACAGCCTGCCCAAGGATATCCCAGATGCTCTGTTCCTAATGTATTACGAGTACTTGTTTTA 767 0.4016 MLDYYQMIDARPSFQDSLKALEADIQHANMLAASIPMDRGWACLQMKLVYNHFAPAFLFLLRWLDCSCSCLHSSYLNLFHIIVYKVHSNRKPTTSSYGRKATIREFYSVILPSLQRLHADSLDVNISEEKSHSFQMVISRNVEDKSKPSDVDLQRENECGICLEPCTKMVLPNCCHAMCVNCYRDWKARSESCPFCRGSFKRVNSGDLWVLTCSSDVIDMQTVFREDILRLYLFINSLPKDIPDALFLMYYEYLF 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01460 255 Pfam Zinc finger, C3HC4 type (RING finger) 156 202 - -
Bva06g01460 255 SUPERFAMILY RING/U-box 149 202 - -
Bva06g01460 255 ProSiteProfiles Zinc finger RING-type profile. 159 197 IPR001841 -
Bva06g01460 255 ProSitePatterns Zinc finger RING-type signature. 174 183 IPR017907 -
Bva06g01460 255 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 125 206 IPR013083 -
Bva06g01460 255 PANTHER OS01G0905700 PROTEIN 9 255 - -
Bva06g01460 255 PANTHER RING FINGER PROTEIN 41, 151 9 255 - -
Bva06g01460 255 SMART ring_2 159 196 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01460 Bva-Chr6 10662604 10665964 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01460 158 235 C3H Transcription Factor Family AT2G20030 35.294 8.15e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01460 - - fve:101303422 398.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01460 06 10662604 10665964 Bva06g01460 06 10662604 10665964 ECH