Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01456 ATGGCAGCTTCAGGAGCTCTGGCAGCAGAGCCAAATCCAGAGGTACTCTTGTGGCTTAAATCTCTCCCTTTGGCTCCAGAGTACAGGCCAACTTTGGCTGAGTTCCAAGATCCAATTTCATACATTTTTAAGATCGAGAAGGAAGCTTCAAAGTATGGAATCTGTAAAATCGTGCCCCCTGTGCCTCCTTCTCCGAAGAAAACGGCAATTGCGAATCTTAATCGCTCTTTGGCGGCCCGAGCTGCTTCCTCTGACTCTTCCAACTCGAAATCTCAGCCTACATTCACCACAAGGCAGCAACAGATCGGGTTCTGCCCTCGGAAACCAAGGCCAGTGCAGCGACCTGTGTGGCAGAGTGGTGAATATTACACCTTTCAGGAATTCGAAGCAAAGGCCAGGGCTTTTGAGAAGAATTATCTGAAGAAATGTACCAGAAAAGGTGGGCTGTCGCCTCTAGAAATAGAAACGCTTTATTGGAAGGCCACAGTGGACAAACCCTTTTCAGTAGAGTACGCAAACGACATGCCTGGCTCGGCTTTTGTTTCCGTTAATGgtaaaaaatgtaaagaggCAGGGGAGGGTGTGACTCTAGGCGAGACAGCATGGAACATGAGGTGGGTGTCAAGGGCAAATGGTTCTTTGTTACGGTTCATGAAAGAGGAGATTCCAGGGGTTACATCACCGATGGTCTATGTAGCCATGTTGTTCAGCTGGTTTGCTTGGCATGTAGAGGATCATGACTTGCATAGCTTGAATTACCTACATATGGGGGCAGGGAAGACGTGGTACGGCGTACCAAGGGATGCCGCTGTGGCATTCGAGGAAGTGGTCAGAGTTCATGGGTATGGAGGAGAAATAAACCCACTTGTTACTTTCGCTATTCTTGGTGAGAAAACCACTGTGATGTCACCTGAAGTGTTTATTAGCGCTGGGATTCCATGCTGCAGGTTAGTGCAGAATGCTGGGGAATTCGTTGTCACATTTCCAAGAGCCTATCACACAGGCTTTAGTCATGGATTTAATTGTGGGGAGGCAGCTAATATTGCCACACCTGAGTGGTTGAGGGTCGCTAAAGATGCTGCTATTCGAAGGGCTTCAATAAATTATCCTCCCATGGTTTCACATTTCCAGTTACTTTATGATCTTGCCCTAGCTTTGTGTTCTAGAATCCCTGGGGGCATCAGCTCTGAACCACGGAGTTCTCGACTTAAAGATAAGAGAAAAGGTGAAGGAGAAACTGTAATTAAAGAACTATTCGTTCAGGATGTCTTACATAATAATGATTTGCTTCATGTACTTGGGAAAGGATCATCTATAGTGCTTCTTCCACGTAGCTCTTCAGACATTTCTGTTTGTTCAAAATTACGCGTTGGATCTCAACAACTAAAAGTGAATCCTGGGTTTGCCCTCAATTCATGCACTTCTGAGGGAATAAATTCCTCAAAGAGTTTTGTTTCTGATGACTTGATGTTCAACAGAAGTCATGGAATCAAGCAAGTGAAAGGTTTATATTctgtaaaagaaaagtttgttTCCCTGTGTGAAAGGAACAGGATTTCCTCATTAACTATAAATGATAACATATGCACTCCAAGTTCTAAGACACTGCAAAGAGACtctaaaagagaaacaaatcaAGGAGATGGCTTGTCAGACCAGAGACTATTTTCTTGTGTCACATGTGGAATATTAAGCTTTGCCTGTGTTGCTATTGTACAGCCTAGAGAACCAGCAGCTAGATACCTTATGTCAGCTGATTGTAGCTTCTTTAATGATTGGGTTGTTGGTTCTGGAGTGACTAGCAATAAATTTACTGTTGGCCATCGAGGTGAAACTATGTCTGAGCAGAACACCTATACAGGGTGGATGGTGAAGAGATCCCCAGATAGTTTGTATGATGTTCCTGTTCAATCTATTGAATACCAAATTCAGATTGCAGATCAATATAACGAGGGGACTTTAAACACTAACAGACGAAATGACAGTTCTGCTCTTGGCTTATTGGCGTCAGCATATGGAAATTCGTCTGACTCAGAGGAAGATCAGGTCAACCCTGATAATACAGTTGACGGTGATGAATCGAATGTGATGAACCATCCATCTGGAAGTAGATGTCAGAAGGAGAGTCCTTGTTTGCGTGGTCATGTTCAATGTGGAgatgattttctttcaaagaatCTTGACAGTTATGAGGATTATAAACATGAAAGAGCCAAGTGTAATAGTAGGAATCATCAGAATTTTGACTATATTGAATCGGAAGATTATGATATCACTTCAATGAAACCAGGTGGTTCAGGGattccatttaaaaatatgaggCCACTGCCCTGTTCCTCCTTGAATTTTTCCCAAGGTGTTCATGATGGTGAAACATCAATTTTTGGCAATGCTATTGTTCCCATTGATGATAAAAACGCTCCATTAATGCCACAATCTGATGAAGACTCATCTAGAATGCACGTCTTTTGTCTAGAGCACGCTGCAGAGGTGGAGCAGCAACTCCGCCCAATAGGAGGAGTGCACATATTGCTTCTATGCCATCCAGATTATCCCAAGATAGAGGCTGAAGCAAAGTTTGTGGCGGAAGAACTGGGAAACAATTACATGTGGAAGAACATTGCGTATAGACATGCCACCAAAGAGGATGAGGAGAGAATTCAGTCGGCTCTGGATAGTGAGGAAGCTATTCCTGGGAATGGAGACTGGGCTGTAAAGCTGGGAATCAATCTCTTTTACAGTGCAAACCTTAGCCGTTCTCCTCTATACAGTAAGCAGATGCCTTACAATTCTGTTATATATTATGCATTTGGTCGTAGCCCTCCAGCAAGCTCAACAACACAGCCCAAGGTCTACCAGAGAAGGACcagcaaacaaaaaaaggtaGTTGCTGGAAAATGGTGTGGCAAAGTTTGGATGTCCAATCAGGTCCATCCCCTTCTTGCAAAAGGAGATTCTGAAGACGATGATGGTGATAAAACCTTGCATGGGTGGATGTTACCTGATGAGAAAATTGAGAGATCTGAAAGTGCTCACAAAGATGTTACACATAGAAAATTTGgtaggaaaaggaaaatgaatgcAGAGAGTGGGGGAGCCAGGAAATTCAGTCAGGTTGAGAGAGAAGCTGCAGTTTCAGATTATTCAATTGAAGAGAAATTCAGCCAACGGCAAAGGAGGATCCTTAGAAGTAAGCAATCCAAGTATATTGAAAGAGAAGGCGCAGCTTCCGAAGAGGATTATTCTCCTCTTTGGCATCATAGAAAACCTGTAAGCAAGCGAACAAAACGCATTGAAAGCAATGATGTTTCAGATGATTCCCTGGATGACAATTCTCATTTGCAGCATAGGAGAAATACTAAAGTcaaggaaacaaaatttattgacaATGATATGGTTTCAGATGATGAAATGGAATATGATTCTGATTGGCAGCAGAGGGGGACATTTAGTAGCAAGCTAGTCAATGATGCAGATGCATTTTCAGAGGATTCACTAGATGGTGGTTCTCTTCAGCTACATAGGAGGACTTCTAAAGGCAAACAAGTCAAATATCTtgctgaagaagaagatgtaATTTCTGATGACCAAATGGAGGACCATTTACCGAAGCAGCATAGGAGGATTCCTAAAAGAAGGCAAGCCAAATACCTTACCGAAGAAGATATCATGGCATCGGATGACCAACTGGAGTATCACAGGCAGAGGCAGCAACAAAGGATTCCTAAAAGCAGGCAAGCCAAATACGCTGCTGGAGAAGACATTACGTCTGATGACCAACTGGATGACCGTCCTATCATGTATCAAAGAAGGACCCCTAAAAGCAGACAAGCCAAGTATATTGCCGAAGATAATATACCTGATGACCAACTTGAGGATCATTCTCTTGTGTATCAAAGAAGGAACCGCAAGAGCAGGAAAGCCAAATGCTTTGTTGGGGAAGATGTAGTGTCTGATGACCAGCCTGAGAATCACTTCCAGAAGCAGCCAAGGAGTGTTCCGAGGAgcagaaaaaacaaatgctTTGACAGAGACGATATAGTTATGGATGAGTCCCctgaaaaaaattctcatctGCTGTCGAGAATTCCTAGAAGGAAGCAAGCTGAATGCATGGACGGAAACAACTCGAATTCAGATTCCCAAGAAGAGAATGATTCTCATCAGCAGCCAAAGAGGGCTGTTCGAAGCAAGCAGTCTAAATCAGAGACACTTCGTCAGATGAAACAAGCTAATCCTCGCCGTGTCAAAAGACAGACATCCTTGCCTATAAAGCGAGGTGCTCGGCTGCTAATGAAGCCGAAAGCTTCTCAGCAAATGAAGCAACCTCCACCTCCCCGTGTGCGGACTAATCAATCTGTGAACTCGAGACAGTTTAGTTTATGTATTGAAGAGGACGAAGAAGGTGGACCAAGCACACGCCTTAGGAAGCGAACCCCAAAGGTTGAGAAGGAGTCTGaagcaaaatcaaaagagaagcaaaccaagaagaaagggaagaatGCTTCAGCTGGCTATGGTGAGGACAAAATGAAGGATGAGGAAGCAGAATATCAGTGTGACATTGAGGGGTGCTCTATGAGCTTTGGCTCAAAACAGGAGCTTGCGATGCATAAGAGGAATATCTGTCCTGTAAAGGGGTGCGGAAAGAAGTTTTTCTCACACAAATATCTGGTACAGCACCGTCGGGTTCACATGGATGACCGCCCCCTGAGGTGTCCTTGGAAGGGCTGCAAGATGACTTTCAAGTGGGCGTGGGCTCGTACCGAACATATTCGAGTTCACACTGGTGCTCGTCCTTATGTCTGTGCCGAGCCAGGCTGCGGCCAAACATTCAGATTTGTCTCCGATTTCAGCCGTCATAAGCGAAAGACGGGTCATTCTGCTAAGAAGAGTCGTTA 4901 0.4222 MAASGALAAEPNPEVLLWLKSLPLAPEYRPTLAEFQDPISYIFKIEKEASKYGICKIVPPVPPSPKKTAIANLNRSLAARAASSDSSNSKSQPTFTTRQQQIGFCPRKPRPVQRPVWQSGEYYTFQEFEAKARAFEKNYLKKCTRKGGLSPLEIETLYWKATVDKPFSVEYANDMPGSAFVSVNGKKCKEAGEGVTLGETAWNMRWVSRANGSLLRFMKEEIPGVTSPMVYVAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRVHGYGGEINPLVTFAILGEKTTVMSPEVFISAGIPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCGEAANIATPEWLRVAKDAAIRRASINYPPMVSHFQLLYDLALALCSRIPGGISSEPRSSRLKDKRKGEGETVIKELFVQDVLHNNDLLHVLGKGSSIVLLPRSSSDISVCSKLRVGSQQLKVNPGFALNSCTSEGINSSKSFVSDDLMFNRSHGIKQVKGLYSVKEKFVSLCERNRISSLTINDNICTPSSKTLQRDSKRETNQGDGLSDQRLFSCVTCGILSFACVAIVQPREPAARYLMSADCSFFNDWVVGSGVTSNKFTVGHRGETMSEQNTYTGWMVKRSPDSLYDVPVQSIEYQIQIADQYNEGTLNTNRRNDSSALGLLASAYGNSSDSEEDQVNPDNTVDGDESNVMNHPSGSRCQKESPCLRGHVQCGDDFLSKNLDSYEDYKHERAKCNSRNHQNFDYIESEDYDITSMKPGGSGIPFKNMRPLPCSSLNFSQGVHDGETSIFGNAIVPIDDKNAPLMPQSDEDSSRMHVFCLEHAAEVEQQLRPIGGVHILLLCHPDYPKIEAEAKFVAEELGNNYMWKNIAYRHATKEDEERIQSALDSEEAIPGNGDWAVKLGINLFYSANLSRSPLYSKQMPYNSVIYYAFGRSPPASSTTQPKVYQRRTSKQKKVVAGKWCGKVWMSNQVHPLLAKGDSEDDDGDKTLHGWMLPDEKIERSESAHKDVTHRKFGRKRKMNAESGGARKFSQVEREAAVSDYSIEEKFSQRQRRILRSKQSKYIEREGAASEEDYSPLWHHRKPVSKRTKRIESNDVSDDSLDDNSHLQHRRNTKVKETKFIDNDMVSDDEMEYDSDWQQRGTFSSKLVNDADAFSEDSLDGGSLQLHRRTSKGKQVKYLAEEEDVISDDQMEDHLPKQHRRIPKRRQAKYLTEEDIMASDDQLEYHRQRQQQRIPKSRQAKYAAGEDITSDDQLDDRPIMYQRRTPKSRQAKYIAEDNIPDDQLEDHSLVYQRRNRKSRKAKCFVGEDVVSDDQPENHFQKQPRSVPRSRKNKCFDRDDIVMDESPEKNSHLLSRIPRRKQAECMDGNNSNSDSQEENDSHQQPKRAVRSKQSKSETLRQMKQANPRRVKRQTSLPIKRGARLLMKPKASQQMKQPPPPRVRTNQSVNSRQFSLCIEEDEEGGPSTRLRKRTPKVEKESEAKSKEKQTKKKGKNASAGYGEDKMKDEEAEYQCDIEGCSMSFGSKQELAMHKRNICPVKGCGKKFFSHKYLVQHRRVHMDDRPLRCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEPGCGQTFRFVSDFSRHKRKTGHSAKKSR 1633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01456 1633 MobiDBLite consensus disorder prediction 1461 1510 - -
Bva06g01456 1633 MobiDBLite consensus disorder prediction 1095 1117 - -
Bva06g01456 1633 SMART cupin_9 196 365 IPR003347 -
Bva06g01456 1633 Gene3D Cupin 18 369 - -
Bva06g01456 1633 PANTHER LYSINE-SPECIFIC DEMETHYLASE 4 1624 - -
Bva06g01456 1633 MobiDBLite consensus disorder prediction 1336 1369 - -
Bva06g01456 1633 MobiDBLite consensus disorder prediction 81 103 - -
Bva06g01456 1633 Pfam JmjC domain, hydroxylase 229 347 IPR003347 -
Bva06g01456 1633 ProSiteProfiles Zinc finger C2H2 type domain profile. 1601 1632 IPR013087 -
Bva06g01456 1633 ProSitePatterns Zinc finger C2H2 type domain signature. 1543 1565 IPR013087 -
Bva06g01456 1633 SMART JmjN_1 24 65 IPR003349 -
Bva06g01456 1633 MobiDBLite consensus disorder prediction 1443 1460 - -
Bva06g01456 1633 SUPERFAMILY beta-beta-alpha zinc fingers 1542 1577 IPR036236 -
Bva06g01456 1633 MobiDBLite consensus disorder prediction 1007 1035 - -
Bva06g01456 1633 MobiDBLite consensus disorder prediction 1320 1510 - -
Bva06g01456 1633 ProSitePatterns Zinc finger C2H2 type domain signature. 1573 1595 IPR013087 -
Bva06g01456 1633 SMART c2h2final6 1541 1565 IPR013087 -
Bva06g01456 1633 SMART c2h2final6 1571 1595 IPR013087 -
Bva06g01456 1633 SMART c2h2final6 1518 1540 IPR013087 -
Bva06g01456 1633 SMART c2h2final6 1601 1627 IPR013087 -
Bva06g01456 1633 ProSiteProfiles JmjC domain profile. 196 365 IPR003347 -
Bva06g01456 1633 ProSiteProfiles Zinc finger C2H2 type domain profile. 1571 1600 IPR013087 -
Bva06g01456 1633 PANTHER LYSINE-SPECIFIC DEMETHYLASE REF6 4 1624 - -
Bva06g01456 1633 SUPERFAMILY Clavaminate synthase-like 210 379 - -
Bva06g01456 1633 MobiDBLite consensus disorder prediction 673 705 - -
Bva06g01456 1633 ProSiteProfiles Zinc finger C2H2 type domain profile. 1541 1570 IPR013087 -
Bva06g01456 1633 Gene3D Classic Zinc Finger 1539 1625 - -
Bva06g01456 1633 MobiDBLite consensus disorder prediction 81 104 - -
Bva06g01456 1633 MobiDBLite consensus disorder prediction 1088 1117 - -
Bva06g01456 1633 SUPERFAMILY beta-beta-alpha zinc fingers 1581 1625 IPR036236 -
Bva06g01456 1633 MobiDBLite consensus disorder prediction 1231 1276 - -
Bva06g01456 1633 MobiDBLite consensus disorder prediction 673 708 - -
Bva06g01456 1633 ProSiteProfiles JmjN domain profile. 25 66 IPR003349 -
Bva06g01456 1633 Pfam jmjN domain 26 59 IPR003349 -
Bva06g01456 1633 ProSitePatterns Zinc finger C2H2 type domain signature. 1603 1627 IPR013087 -
Bva06g01456 1633 MobiDBLite consensus disorder prediction 1255 1276 - -
Bva06g01456 1633 MobiDBLite consensus disorder prediction 1385 1403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01456 Bva-Chr6 10611005 10619102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01456 1190 1632 C2H2 Transcription Factor Family AT3G48430 35.991 3.65e-67 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva06g01456 JmjC 1e-35 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01456 - - gmx:100775813 2061.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01456 06 10611005 10619102 Bva05g00291 05 1419474 1427345 BWGD
Bva06g01456 06 10611005 10619102 Bva06g01456 06 10611005 10619102 ECH