Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01452 ATGGAGCCGGGTGGCAGCCAAAGACAGGGCAGATCATCAAGGGTGGCTTTAGTGCATATGCCACGTGGAGACAACAAAGCAGTAATCCTAAACCTCGCAGCTGGTGACGTTTTCGCTAACCGATTGAGACACGGACACTGGCTGGGAAAGGTGATAACCCTCTACTTCGGAATCCGCTGCTTCCGATCACTGGAGCTTAACTTGGATAGGGTTTCTGAAACTTGCTCTTTCGGATCTTGTTTGTTAGCTTTCGTGATCTTGGGCGTTATTGGGTTCAACTCGAGTGGTACGATTTGGAATTCCGGTTGCTTCTACTGTCTTGGCTCGAGATCCGGGCCAAGCACAGAAGAATCAGATTCAGATTTACTTTCAATAATCTTCAACTTCTTAGACAGGGTTGAATTTCTTTGTTCTCCGACTTCTTTGCTTTCTGAACATCATATTAAAGCTCCCGCTGGCGGAAAGGCACAAACTGCTGGGATTGCTGTGAGGCATGTACGTCGGTCACATTCTGGAAAGTTCGTGCGGGTGAAGAAGGATGGTGCTGGTGGTAAGGGCACTTGGGGGAAATTGCTTGACACTGATGGTGAGCCTCGTATAGACAGGAATGATCCTAACTATGACAGTGGCGAGGAACCTTATCAGCTCGTCGGTTCCACTGTAACTAACCCCCTGGATGAATTCAAGAAAGCTGTTGTATCCATTATAGAGGAATACTTTAGCACTAGAGATGTGGAAGTGGCTGCATCTGACCTCAGAGAACTTGGCTCAAGTGAATATTATCCATACTTCATCAAGCGACTTGTGTCCATGGCTATGGACAGGCATGACAAGGAGAAAGAAATGGCTTCGGTTCTGCTTTCAGCTTTGTATGCTGATGTCATCAGTCCTGCTCAGATCAGGGATGGATTTTTTATGCTTATTGAATCTGCTGATGATCTTGCAGTCGACATACTGGATGCAGTTGACATCCTTGCCCTATTCCTGGCACGTGCTGTTGTGGATGACATCCTTCCTCCAGCCTTCCTTGCCAGAGCAAAGAAGGCACTTCCAGAATTGTCCAAGGGGGTTCAAGTAATCCAGACTGCTGAGAAGAGTTATCTCTCAGCTCCCCACCATGCAGAACTTGTGGAGAGGCGGTGGGGTGGTAGCACTCACATCACTGTTgaagaagtaaaaaagaagattGCTGATTTATTAAGAGAATATGTGGAGAGTGGTGATACATTTGAAGCCTGCAGGTGTATAAGGGAATTGGGGGTTTCATTCTTCCATCATGAGGTTGTGAAAAGGGCTCTGGTGCTTGCTATGGAGATTCGTTCAGCAGAACCCCTCATATTGAAGCTATTGAAAGAAGCTGCAGAAGAAGGACTTGTTAGTTCCAGCCAAATGGTGAAAGGGTTCTCTCGTTTAGCAGAAGGCTTGGATGATCTTGCTCTTGATATTCCATCAGCTAAAAGCTCATTTCGGTCATTAGTCCTCAAAGCAATATCTGATGGATGGCTTGATCCTTCATTTGTGAAGCCCTCTGTTGAAGATGGGGGTATacaaattgaagacaaaaaacTGAGGAGTTACAAACAAGAGGCTGTAACGATAATTCATGAGTATTTTCTTTCTGATGATATTCCCGAGCTCATTCGGAGTCTTGAAGATCTTGGGGCACCAGAGTATAACCCAGTATTCTTGAAGAGGCTAATCACTCTTGCTATGGACAGAAAAAACAGGGAAAAGGAAATGGCATCCGTACTGCTCTCTGCTCTTCACATAGAGATCTTTTCAACAGAGGATATAGTTAATGGTTTTGTCATGCTTCTGGAATCTGCAGAAGATACAGCATTGGACATATTGGATGCTTCAAATGAGCTTGCTCTCTTTCTAGCTAGGGCTGTGATTGATGATGTGTTGGCGCCGCTGAATTTGGAAGAAATAGGCAGCAAATTACCACCGAAGTGCAGTGGGAGTGAAACTGTGCGGATGGCTCGTTCACTAATTGCTGCTCGTCATGCTGGTGAGAGGCTCTTGAGATGTTGGGGCGGTGGCACTGGATGGGCTGTGGAGGATGCTAAGGACAAGATCATGAAGCTCCTAGAGGAGTACGAAAGCGGGGGTGTCGTAAGTGAAGCTTGTCAGTGTATTCGTGACCTTGGAATGCCATTTTTCAACCACGAGGTTGTGAAGAAAGCATTGGTTATGGCCatggaaaagaagaatgataGGATGCTGGATCTGCTTCAAGAATGCTTTAGTGAAGGTCTTATCACCATCAATCAGATGACCAAAGGGTTCACCCGGATCAAGGATGGTCTTGATGATCTGGCTCTGGATATTCCGAATGCCAAGGAAAAATTTTGCTTCTATGTGGAGCATGCCCATAGGAAGGGATGGCTTCTTCCATCATTTGATTCGACTGCTACAGATGTCTCTGACTG 2432 0.4515 MEPGGSQRQGRSSRVALVHMPRGDNKAVILNLAAGDVFANRLRHGHWLGKVITLYFGIRCFRSLELNLDRVSETCSFGSCLLAFVILGVIGFNSSGTIWNSGCFYCLGSRSGPSTEESDSDLLSIIFNFLDRVEFLCSPTSLLSEHHIKAPAGGKAQTAGIAVRHVRRSHSGKFVRVKKDGAGGKGTWGKLLDTDGEPRIDRNDPNYDSGEEPYQLVGSTVTNPLDEFKKAVVSIIEEYFSTRDVEVAASDLRELGSSEYYPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPAQIRDGFFMLIESADDLAVDILDAVDILALFLARAVVDDILPPAFLARAKKALPELSKGVQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVESGDTFEACRCIRELGVSFFHHEVVKRALVLAMEIRSAEPLILKLLKEAAEEGLVSSSQMVKGFSRLAEGLDDLALDIPSAKSSFRSLVLKAISDGWLDPSFVKPSVEDGGIQIEDKKLRSYKQEAVTIIHEYFLSDDIPELIRSLEDLGAPEYNPVFLKRLITLAMDRKNREKEMASVLLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIGSKLPPKCSGSETVRMARSLIAARHAGERLLRCWGGGTGWAVEDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDRMLDLLQECFSEGLITINQMTKGFTRIKDGLDDLALDIPNAKEKFCFYVEHAHRKGWLLPSFDSTATDVSD 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01452 810 ProSiteProfiles MI domain profile. 227 348 IPR003891 -
Bva06g01452 810 SMART ma3_7 526 637 IPR003891 -
Bva06g01452 810 SMART ma3_7 689 798 IPR003891 -
Bva06g01452 810 SMART ma3_7 228 339 IPR003891 -
Bva06g01452 810 SMART ma3_7 392 503 IPR003891 -
Bva06g01452 810 PANTHER PROGRAMMED CELL DEATH PROTEIN 4-LIKE 140 800 - -
Bva06g01452 810 SUPERFAMILY ARM repeat 524 681 IPR016024 -
Bva06g01452 810 ProSiteProfiles MI domain profile. 688 807 IPR003891 -
Bva06g01452 810 ProSiteProfiles MI domain profile. 391 512 IPR003891 -
Bva06g01452 810 SUPERFAMILY ARM repeat 685 802 IPR016024 -
Bva06g01452 810 ProSiteProfiles MI domain profile. 525 646 IPR003891 -
Bva06g01452 810 Gene3D - 219 368 - -
Bva06g01452 810 Gene3D - 517 669 - -
Bva06g01452 810 PANTHER PROGRAMMED CELL DEATH 4 140 800 IPR039778 GO:0045892
Bva06g01452 810 Gene3D - 378 510 - -
Bva06g01452 810 Gene3D - 676 805 - -
Bva06g01452 810 SUPERFAMILY ARM repeat 388 509 IPR016024 -
Bva06g01452 810 SUPERFAMILY ARM repeat 225 385 IPR016024 -
Bva06g01452 810 Pfam MA3 domain 392 503 IPR003891 -
Bva06g01452 810 Pfam MA3 domain 527 636 IPR003891 -
Bva06g01452 810 Pfam MA3 domain 690 797 IPR003891 -
Bva06g01452 810 Pfam MA3 domain 228 339 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01452 Bva-Chr6 10590007 10594638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01452 692 784 Eukaryotic Initiation Factors Gene Family AT5G57870 32.292 4.54e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01452 - - gmx:100809081 1185.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01452 06 10590007 10594638 Bva06g01452 06 10590007 10594638 ECH