Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01446 ATGGACGGACAGACCATATTTTCTGGACATGTTAATGGAAATCTTCGCCTATGGGATTTTCAGACAGAAAAGCTACTTAGCGAAGTTGCTGCACATTCACTCGCGATCACATCAATATCTCTTTCTCGAGATGGAAATGTTATCTTGACTAGTGGGAGGGACAATGCCCAGAATTTGTTTGATGTGCGATCTCTTGAAGTTTGTGGTACTCTTAGAGCCACTGGAAACAGAGTGACATCTAATTGGAGCCGTTCCTGTATTAGTCCAGATGACAACCATGTTGCTGCTGGATCTTTCCATACACGGTCAATGTCGAGGGCCTATGTAGTGAGCACTATGGAGGAACACACCTCTTCTGTCTTGTGTTGTTCATGGAGTGGGCTTGGGAAGCCCCTAGCTTCAGCTGACAAGAGTGGGGTTGTTTGCATCTGGACATA 437 0.4554 MDGQTIFSGHVNGNLRLWDFQTEKLLSEVAAHSLAITSISLSRDGNVILTSGRDNAQNLFDVRSLEVCGTLRATGNRVTSNWSRSCISPDDNHVAAGSFHTRSMSRAYVVSTMEEHTSSVLCCSWSGLGKPLASADKSGVVCIWT 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01446 145 PANTHER AUTOPHAGY PROTEIN 16-LIKE 2 145 IPR045160 GO:0000045
Bva06g01446 145 Gene3D - 1 145 IPR015943 GO:0005515
Bva06g01446 145 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 113 145 - -
Bva06g01446 145 ProSiteProfiles Trp-Asp (WD) repeats profile. 113 145 IPR001680 GO:0005515
Bva06g01446 145 Pfam WD domain, G-beta repeat 24 55 IPR001680 GO:0005515
Bva06g01446 145 Pfam WD domain, G-beta repeat 111 144 IPR001680 GO:0005515
Bva06g01446 145 ProSitePatterns Trp-Asp (WD) repeats signature. 6 20 IPR019775 -
Bva06g01446 145 SUPERFAMILY WD40 repeat-like 2 145 IPR036322 GO:0005515
Bva06g01446 145 PANTHER AUTOPHAGY-RELATED 16, ISOFORM F 2 145 - -
Bva06g01446 145 ProSiteProfiles Trp-Asp (WD) repeats profile. 29 64 IPR001680 GO:0005515
Bva06g01446 145 SMART WD40_4 22 61 IPR001680 GO:0005515
Bva06g01446 145 SMART WD40_4 106 145 IPR001680 GO:0005515
Bva06g01446 145 ProSiteProfiles Trp-Asp (WD) repeats profile. 1 28 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01446 Bva-Chr6 10556270 10558349 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01446 4 97 Eukaryotic Initiation Factors Gene Family AT2G46290 36.082 3.68e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01446 K17890 - gmx:100778336 243.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01446 06 10556270 10558349 Bva06g01446 06 10556270 10558349 ECH