Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01441 ATGGACAACCTCCTCTTCCTTGTTTCATTCTTGTCACTTGCCTTGTTCATCCATGCCAGAATCGATCTCGACCCTTCAGACCTCAAAGCTCTTTCCATCATCAAAAAGGATTTGGGAGTGAAGGATCAACTCCACCCATCTACCCACCCATGTAACACCCAAGGTGTCTTGTGTGAGAGGAGACTCTCACACAATGAGAGCTATGTTCTCAAAATCACAAGGCTCTCCTTCAAATCCCAGCAGCTTAATGGGGTTTTGTCCCCTGCAATTGGACGCCTCACAGAGCTCAAAGAGCTCTCTCTTTCAAACAACCAGCTCGTTGACCAAATCCCGTCCCAGATAGTTGACTGCCGGAAACTGGAAATTCTAGATCTCAGAAACAACCGCTTCTCCGGCCAAGTTCCTTCTGAATTATCCTCTCTCGTTCGCCTTCGTGTTCTTGATGTTTCTTCCAACAAATTTTCTGggaatttgaatttcttgaagCATTTCCCCAATTTGGAAAGCCTCTCCGTTGCCGACAATCTCTTCGCAGGGAGAGTCCCGGTATCCATTCGTTCATTTCGTAATCTCCGGCACTTTAACTTTTCCGGGAATCAATTCCTTGAAGGTTCAGTGCCACtgatgaagaaatttgaatactCAGAATCAGAGTCAGAGGACTCCAGACGTTACCTCCTTGGTACAACTCCAACTCCAAGTGGAAGCAGAAACAAGCCTGCATCTGCCCCAACATCCAGCAAGAGTAGTTCTAATGCTGACGCTCCTAGTCCATCGTCAGGGTCAACCCCAAAGAAACACAAGTCAAGCAAGAGGAAATTAAGTGGGTGGATACTTGGATTTGTAGCTGGAGCACTGGCTGGGAGCATTTCTGGGTTCATATTCTCTTTGCTATTCAAGTTGGCCATAGCTTTGTTCAAAGGGAGAGGGAAGATCTCTGGACCTGATATTTACAGTCCTCTTATCAAAAAAGAGGACTTGGCTTTCTTAGAAAAAGAAGACGGGCTGGCTTCATTAGAAGTCGTAGGAAGAGGcgcatgtggacaagtttacAGAGCTGAATTGCCAGGAAGCAACGGCAAAATGATTGCCATTAAGAAGATTGTTCAACCTCCAAAAGATACAGCAGAATTAGCAGAATTATCTGAAGAGGATAGTAAGCTTTTGAACAAAAGAATGCGTCAAATTCGATCAGAGATTAACACAGTTGGTCTAATTCGACATCGCAATCTTTTACCCTTGCTTGCCCATGTGTCCAAACCTGATTGCCACTATCTTGTCTATGAATTCATGAAGAATGGAAGTTTACAAGATATGCTGATTAGAGCTCAACAGGGTACAGTGGAGTTGGATTGGTTGTCACGGCACAAGATTGCAGTTGGAATTGCAGCTGGCCTTGAGTACCTTCATTCGAGCCACACCCCACGCATTATTCATAGAGATCTCAAGCCAGCAAACATTCTTCTTGATGATGAAATAGAAGCTCGTATTGCAGATTTTGGGCTTGCAAAAGCAATGCCAGATGCTAACACACATATCACCACTTCAGTTCTTGCAGGCACAGTGGGGTATATAGCACCAGAATATCACCAAACTCTCAAGTTCACAGACAAGTGTGATATTTACAGCTTTGGGGTTGTGCTTGGCGTCTTGGTGATGGGAAAGTTTCCATCTGATGAATTTTTCCAGCACACAGAGGAAATGAgtttggttaagtggatgagaAACGTGGTGTCTTCGGAGGATCCCAGGCGAGCAATTGATCAAAAACTGATGAACAACGGATTTGAGGAGCAAATGCTTCTAGTTCTCAAGATCGCCTGCTTTTGCACCATGGATGACCCAAAAACAAGGCCTAACGGCAAGGATGTTAGGGTCATGTTAACCCAAATCAAGCATTG 1901 0.4308 MDNLLFLVSFLSLALFIHARIDLDPSDLKALSIIKKDLGVKDQLHPSTHPCNTQGVLCERRLSHNESYVLKITRLSFKSQQLNGVLSPAIGRLTELKELSLSNNQLVDQIPSQIVDCRKLEILDLRNNRFSGQVPSELSSLVRLRVLDVSSNKFSGNLNFLKHFPNLESLSVADNLFAGRVPVSIRSFRNLRHFNFSGNQFLEGSVPLMKKFEYSESESEDSRRYLLGTTPTPSGSRNKPASAPTSSKSSSNADAPSPSSGSTPKKHKSSKRKLSGWILGFVAGALAGSISGFIFSLLFKLAIALFKGRGKISGPDIYSPLIKKEDLAFLEKEDGLASLEVVGRGACGQVYRAELPGSNGKMIAIKKIVQPPKDTAELAELSEEDSKLLNKRMRQIRSEINTVGLIRHRNLLPLLAHVSKPDCHYLVYEFMKNGSLQDMLIRAQQGTVELDWLSRHKIAVGIAAGLEYLHSSHTPRIIHRDLKPANILLDDEIEARIADFGLAKAMPDANTHITTSVLAGTVGYIAPEYHQTLKFTDKCDIYSFGVVLGVLVMGKFPSDEFFQHTEEMSLVKWMRNVVSSEDPRRAIDQKLMNNGFEEQMLLVLKIACFCTMDDPKTRPNGKDVRVMLTQIKH 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01441 633 SMART serkin_6 336 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01441 633 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 633 - -
Bva06g01441 633 Gene3D Ribonuclease Inhibitor 27 138 IPR032675 -
Bva06g01441 633 Gene3D Phosphorylase Kinase; domain 1 328 430 - -
Bva06g01441 633 SUPERFAMILY L domain-like 47 202 - -
Bva06g01441 633 Pfam Protein kinase domain 339 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01441 633 SUPERFAMILY Protein kinase-like (PK-like) 333 629 IPR011009 -
Bva06g01441 633 MobiDBLite consensus disorder prediction 224 264 - -
Bva06g01441 633 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE KINASE 5 633 - -
Bva06g01441 633 Gene3D Transferase(Phosphotransferase) domain 1 431 633 - -
Bva06g01441 633 Pfam Leucine rich repeat 95 154 IPR001611 GO:0005515
Bva06g01441 633 ProSiteProfiles Protein kinase domain profile. 336 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01441 633 MobiDBLite consensus disorder prediction 220 269 - -
Bva06g01441 633 Gene3D Ribonuclease Inhibitor 139 212 IPR032675 -
Bva06g01441 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01441 Bva-Chr6 10540819 10542965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01441 4 633 Receptor kinase-like Gene Family AT2G31880 63.050 0.0 814
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Bva06g01441 Pkinase 5.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01441 - - qsu:111990511 892.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01441 06 10540819 10542965 Bva06g01441 06 10540819 10542965 ECH