Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01425 ATGCCGCAGGATTCATCCGGGAAAGACATAGACGACACGGATGCCGAGTTTGCCGAGATTGATCCTACCGGTCGATATGGTCGGTACAAAGAGGTTTTAGGGAAGGGAGCTTTCAAAAAAGTATATCGAGCATTTGATGAATTGGAAGGAATTGAAGTGGCCTGGAATCAGGTTAAGGTGGCAGAGATGTTGCGCAAATCGGAAGATTTGGAGCGCCTATATTCAGAAGTTAATTTGCTGAAGACCTTgaagcataaaaatataattaaattttataattcatggATTGATACCAAGCATGAGAATATCAACATCATTACTGAAGTTTTCACGTCAGGGACATTACGCCAataCCGGAAGAAGCACAAGCAGGTTGATTTGAGAGCATTGAAGAAATGGTCTAGGCAGATTTTGGAGGGTCTTTTTTATCTTCACAGTCATGACCCACCTGTTATTCATCGCGATCTAAAGTGTGACAACATTTTCGTCAATGGAAATCAAGGGGAAGTGAAAATTGGTGACTTAGGATTGGCAGTTTTTCTTCGGCAGGCCCATTCAGCTCACAGTGTCATAGGAACTCCAGAGTTTATGGCCCCAGAACTCTACGAAGAAGAGTATAACGAGCTTGTTGACATCTATGCTTTTGGCATGTGCTTGCTGGAGTTGGTGACCTTCGAGTACCCCTATGTTGAATGTGCCAATGCTGCTCAAATATTCAAGAAAGTGACATCTGGAATAAAGCCAGCGTCTTTGTCAAAAGTGACTGACCCTGGAGTTAAAGCATTTATCGAGAAGTGTATTGCACGTGCTTCTGAACGATTGCCTGCGAAGGATCTCTTAATGGATCCCTTTCTTTACTCGGATGATGAGATTGATAGTGTTGGTCGTTCTTTATGGGCAAAGGCCTATCAGCTCGGACGTCTTGGTGGCCATCATGCCCTTGGTAAAAGTGCTGAGGATAATTTTGCTGAGACAAGTAGGGAATTCACTGTGGAAGGTCAAAGGAGAGATGTTAATACAATATTTCTGAAACTGCGAATAGCAGACTCCTCAGGTCATATACGCAATATCCACTTCCCCTTTGATATTGAAGAAGATACTGCAATTGCTGTTGCTAGTGAAATGGTTGAGGAATTGGAACTCACCGACCAAGATGTTACAACTATTGCTGAGATGATTGACTCAGAAATTCGATATCATATTCCAGATTGGAGTCCCAGTGAAGCTCACGGTGATGGTTTTGTTCAAGAGTTAGCAGTTTCAGGAGGCTGTTCCTCTTTTACTAAGGTTGAGGCTTCTCCTATGGGAAATGAGTCCTCCTCTTCTACTGCTAATCTTGCACTAGAGAGATTACCTTCAGGTCGTAAGTACTGGTCTGATTCACCCAAGGCAGGTGGAAACTCTCCATTAAGACTAGGTGCTTCAAACTTGCCTTCTCTTGTGGAGCTGAACGCTGAAGGCGGCAACACCACGGCAAATGGTGCTACTTCAACTAAGCAGTCAGATTGCAAGTGCACCAGTGCTGGTGATTCTAGTGTTGAGAAGGAATCTGGTGAGACTGCTGATTCTAATTCCAGTGAGAGAAGTATGACCTCTGGGGTTTTACAGATAGTCAATGGAGAATCTCCTGTGGGAGAAGAGCCTGAAAGATTGAAAGATTCTGAATTAGAAGATATCGATATAATTTCTGAAAAACTGGCGAATCTATTGGCAAGACAACAGGAAGAGTTAGATGAACTGAAGAGGAAGCATAAGTTAGCTGTCTCAGATCTTGTGAGCAAACTCTCTCCAGAAATGCGTGAAAAAGTCTTGAATACGTGTAATCTTAATTTACTTGACGGTGGAGACGTACATAGTGAGGCTTG 1865 0.4252 MPQDSSGKDIDDTDAEFAEIDPTGRYGRYKEVLGKGAFKKVYRAFDELEGIEVAWNQVKVAEMLRKSEDLERLYSEVNLLKTLKHKNIIKFYNSWIDTKHENINIITEVFTSGTLRQYRKKHKQVDLRALKKWSRQILEGLFYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAVFLRQAHSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTFEYPYVECANAAQIFKKVTSGIKPASLSKVTDPGVKAFIEKCIARASERLPAKDLLMDPFLYSDDEIDSVGRSLWAKAYQLGRLGGHHALGKSAEDNFAETSREFTVEGQRRDVNTIFLKLRIADSSGHIRNIHFPFDIEEDTAIAVASEMVEELELTDQDVTTIAEMIDSEIRYHIPDWSPSEAHGDGFVQELAVSGGCSSFTKVEASPMGNESSSSTANLALERLPSGRKYWSDSPKAGGNSPLRLGASNLPSLVELNAEGGNTTANGATSTKQSDCKCTSAGDSSVEKESGETADSNSSERSMTSGVLQIVNGESPVGEEPERLKDSELEDIDIISEKLANLLARQQEELDELKRKHKLAVSDLVSKLSPEMREKVLNTCNLNLLDGGDVHSEA 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01425 621 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Bva06g01425 621 Coils Coil 563 590 - -
Bva06g01425 621 Gene3D - 339 407 - -
Bva06g01425 621 MobiDBLite consensus disorder prediction 484 551 - -
Bva06g01425 621 Gene3D Transferase(Phosphotransferase) domain 1 110 292 - -
Bva06g01425 621 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01425 621 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 613 - -
Bva06g01425 621 SUPERFAMILY Protein kinase-like (PK-like) 29 295 IPR011009 -
Bva06g01425 621 MobiDBLite consensus disorder prediction 484 514 - -
Bva06g01425 621 CDD STKc_WNK 25 285 - -
Bva06g01425 621 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 6 613 - -
Bva06g01425 621 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01425 621 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01425 621 MobiDBLite consensus disorder prediction 523 538 - -
Bva06g01425 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Bva06g01425 621 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 343 397 IPR024678 GO:0004674|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01425 Bva-Chr6 10473904 10478620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01425 103 604 MAP Kinase Kinase Kinase AT3G48260 52.976 2.37e-165 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Bva06g01425 Pkinase 2.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01425 K08867 - qsu:112036538 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01425 06 10473904 10478620 Bva06g01425 06 10473904 10478620 ECH