Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01364 ATGCGGATCACGGCTTTCACTCTCTCTTCTTCACTTCCTCTTCACAGACTTCGCAAACGTGGCGCCTCTCTTCGGTTCGATCCCATTCGCCTTTCTGCTTCCTCTTCCAAACCAAATGAAAGCATCAATATCGTATGCTCAACCTCTTTCGCTCGCCGATCCTGGTGTTTGTCTCCTTCATCCGCCTTTAAATTTAGACCCTTTTCCTCCATTCCTCCCTCAGATCCCAGTGTGAACCGTTTAGAGGCCGGGGCTACTTCAGTACCCGAGAGCGCCGATGAGAGCTCCGGCAGCTTATTCAAAACAGTCGAACTTGGGGTCTTATTTGGCCTCTGGTACCTGTTTAATATCTACTTCAATATCTATGACAAACAGGTTTTGAAGGTGTACCATTTTCCTATAACCATCACTCTATTTCAGCTTGCCGTTGGGTCTGTACTTGTACTACTTATGTGGGGTTTAAATCTTTACAAAAGACCTAAGATCAGCGGTGCCCAGCTTGCAGCAATACTGCCTTTGGCTGTGGTACACATTTTAGGGAACCTTTTCACCAATATGAGTCTTGGAAAGGTGTCCGTGTCATTCACTCACACGATCAAAGCAATGGAGCCCTTCTTTACGGTGATTCTTTCTGCGATGTTCCTTGGAGAGCTGCCTACTGGATGGGTGGTCACTTCCCTCGTACCTATTGTTGGTGGAGTGGTACTGGCATCAGCTACTGAGACCTCCTTCAATTGGGCTGGATTTTGGAGTGCAATGGCTTCCAATTTGACAAATCAATCTCGTAATGTACTCAGCAAAAAGCTCATGGTTAAAAAAGAGGAATCTATGGACAACATAACCCTCTTCTCAATTATAACAGTTATGTCCTTCTTGTTGTTGGCACCTGCAGCCTTATTTATGGACGGTGTCAAATTTACACCTGCATACCTGCAATCTGCTGGGTTAAATCTTAGACAAGTATACACCAGGTCTCTTCTTGCGGCCCTCTGTTTCCATGCATATCAGCAAATTTCTTATATGATATTGCAGAGGGTATCACCTGTTACCCATTCTGTGGGCAACTGTGTGAAGCGGATCGTGGTCATTGTGAGCTCTGTCATCTTCTTCCAAACACCTGTCTCATTTATTAACGCTCTTGGGACTGGTGTGGCTCTTGCTGGGGTTTTCCTCTATTCAAGAGTGAAGCGAATTAAGCCAAAGGCAAAGACAGCTTA 1217 0.4544 MRITAFTLSSSLPLHRLRKRGASLRFDPIRLSASSSKPNESINIVCSTSFARRSWCLSPSSAFKFRPFSSIPPSDPSVNRLEAGATSVPESADESSGSLFKTVELGVLFGLWYLFNIYFNIYDKQVLKVYHFPITITLFQLAVGSVLVLLMWGLNLYKRPKISGAQLAAILPLAVVHILGNLFTNMSLGKVSVSFTHTIKAMEPFFTVILSAMFLGELPTGWVVTSLVPIVGGVVLASATETSFNWAGFWSAMASNLTNQSRNVLSKKLMVKKEESMDNITLFSIITVMSFLLLAPAALFMDGVKFTPAYLQSAGLNLRQVYTRSLLAALCFHAYQQISYMILQRVSPVTHSVGNCVKRIVVIVSSVIFFQTPVSFINALGTGVALAGVFLYSRVKRIKPKAKTA 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01364 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 290 397 - -
Bva06g01364 405 PANTHER SOLUTE CARRIER FAMILY 35 81 379 - -
Bva06g01364 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 147 238 - -
Bva06g01364 405 Pfam Triose-phosphate Transporter family 104 393 IPR004853 -
Bva06g01364 405 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 81 379 - -
Bva06g01364 405 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 104 403 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01364 Bva-Chr6 10163179 10166957 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01364 6 405 Antiporters AT5G33320 71.605 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01364 K15283 - jre:108991483 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01364 06 10163179 10166957 Bva05g00362 05 1790973 1795214 ECH
Bva06g01364 06 10163179 10166957 Bva06g01364 06 10163179 10166957 ECH