Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01363 ATGCATTTGCAAGACAACTACTTGAGAGCTAACATGAGAGAGGAGCTTCCTTTAGGGGTTCCTTCGTCTCAGGATTTCTTGCAAGATTTTgataatcaatttcaatttcctgTAAATGGGTATTCGTTATACCCAGCTTTTGGCGTCCAAACTCAGAGTTTTGATCCTTATCATAGTTTCAACTATGGCTGTTCTTCTTCAGATTTTGATGCTTATGAGTGCAAGCCATTTTCTGGAAATAATGGCAGTGGCCATGCTCAAGTCATGGACAATTTCCAGTATGGAAGTTATGGTTTCAACATCTTTCAGAAGAACAACCATCAAGTGGATACGATGGATGGAAGCCAAAGTTGTGTGCCCTTTAATTATCAAGAAATCATCAAGCCCGTGAATTTTGTTATACCAGATGAGGTCTCATGCATATCATCATCGGCAAATTACCACAGAAAAGTTGGCTTGAACAAAAATGATAAGGCATCTGCAATTGCTAGAAGGACACACAAATTCCGGAACAAGTCCAGTATGGTGAAAGGACAGTGGACGGTTGATGAAGATAGGTTGTTGATTCAGCTGGTTGACCAATATGGGCTGAGGAAGTGGTCTCATATTGCTCAAATGTTGCCTGGAAGAATTGGCAAACAGTGTAGAGAGCGATGGCATAACCATCTAAGACCTGACATTAAGAAGGATACATGGACTGATGAAGAGGATAAAATACTTATCCAAGCTCATTCTGAGATAGGAAATAAATGGGCAGAGATTGCAAAAAGATTGGCTGGGAGAACTGAAAACTCAATCAAAAACCATTGGAATGCAACCAAGAGAAGGCAATATTCCAAGAGAAAATGCCGCTCAAAGAATTCTAGAAGCTCTCTTCTTCAGGAATATATAAAGAGCTTGAACTTAGACCAAATCCCACCAGCAGGTTACATGAAAAAATCTTCTGCCAAAGCTATCACTAGcaaagcagcagcagcaactcAGCCCCAAAACATTGCACATCAGTTTTATCCCAACGACCGTTTGGTACCTAATTACGATTTCAACGAAGTCCCAGATTTTTGTTTCGATGAGAATTTTTTTCGAGAGGGATGTAACATTGATTCTCTACTGGATGATATGCCTTGTGCTCCTACTATAGATCATGAAAAAGACTTTGAAGGACCAAAACTGCCTCTTGTTAATGTCGACGAGCATCATTTTGAGAATAAGGATCCATGTGGCACCCATAGTGGGTGGTG 1241 0.39 MHLQDNYLRANMREELPLGVPSSQDFLQDFDNQFQFPVNGYSLYPAFGVQTQSFDPYHSFNYGCSSSDFDAYECKPFSGNNGSGHAQVMDNFQYGSYGFNIFQKNNHQVDTMDGSQSCVPFNYQEIIKPVNFVIPDEVSCISSSANYHRKVGLNKNDKASAIARRTHKFRNKSSMVKGQWTVDEDRLLIQLVDQYGLRKWSHIAQMLPGRIGKQCRERWHNHLRPDIKKDTWTDEEDKILIQAHSEIGNKWAEIAKRLAGRTENSIKNHWNATKRRQYSKRKCRSKNSRSSLLQEYIKSLNLDQIPPAGYMKKSSAKAITSKAAAATQPQNIAHQFYPNDRLVPNYDFNEVPDFCFDENFFREGCNIDSLLDDMPCAPTIDHEKDFEGPKLPLVNVDEHHFENKDPCGTHSGW 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01363 413 Pfam Myb-like DNA-binding domain 180 236 - -
Bva06g01363 413 PANTHER BNAC03G62830D PROTEIN 118 369 - -
Bva06g01363 413 Gene3D - 230 298 - -
Bva06g01363 413 ProSiteProfiles Myb-like domain profile. 224 274 IPR001005 -
Bva06g01363 413 SMART sant 176 225 IPR001005 -
Bva06g01363 413 SMART sant 228 276 IPR001005 -
Bva06g01363 413 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 172 227 IPR017930 -
Bva06g01363 413 CDD SANT 231 274 IPR001005 -
Bva06g01363 413 PANTHER MYB PROTEIN-RELATED 118 369 - -
Bva06g01363 413 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 228 278 IPR017930 -
Bva06g01363 413 CDD SANT 180 223 IPR001005 -
Bva06g01363 413 SUPERFAMILY Homeodomain-like 175 270 IPR009057 -
Bva06g01363 413 Gene3D - 169 229 - -
Bva06g01363 413 ProSiteProfiles Myb-like domain profile. 172 223 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01363 Bva-Chr6 10160103 10161721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01363 45 381 MYB Transcription Factor Family AT4G18770 49.176 1.51e-101 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva06g01363 Myb_DNA-bind_6 4.3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01363 K09422 - gmx:100781456 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00363 05 1796145 1797691 Bva06g01363 06 10160103 10161721 BWGD
Bva06g01363 06 10160103 10161721 Bva05g00363 05 1796145 1797691 ECH
Bva06g01363 06 10160103 10161721 Bva06g01363 06 10160103 10161721 ECH