Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01349 ATGGAAGGAAGGGATGCATATAAGAAGGGATTGTGGAACGTGGAGGAAGACAAAATTCTAATGGATTACATAAAGAAGCATGGCATAGGGAGGTGGAATCGTATACCCAAAGTTTCAGGGTTGAAGAGATGTGGGAAAAGTTGCAGATTGAGGTGGATGAACTATCTTAGTCCAAATGTTAAGCGTGGGGATTTCTCTGCGGAAGAAGAAGACTTAATTATACGCCTCCATAGTCTACTTGGAAACagGTGGTCTCTGATCGCAGGGAGGGTACCAGGGAGGACAGACAATCAGGTCAAGAACTATTGGAACACTCGTTTGAGCAGAAAGCTGGGTGTGAAAGAAGGCAAGACCAAAGTCTCTGCTTTTCCAAATACACTAACGAATATTGAACCGAAGGAAAATTCCAATAGCCCCTCGGGCTCAAACTCTAAATCTTTAGGACCCTTGGATTGTAATAGTAGCTGCGCAGGTGATGAGGTTGCTGTGGAGCCTGACAACTCTCTCCAAGCTTGCTCTCTAGGGACCCAGGATTTCAAAGACAGCATGCAGGATACGATAACGGGCGAAGATGATTTTGAGAACAATCTTTGGTTTTCAAACACTGCTTTTGACCTGTGCACCCCATTCCTATCGGAGCCTTTTGATGGCCTTGATTGGCCTGCTTTGTA 671 0.4501 MEGRDAYKKGLWNVEEDKILMDYIKKHGIGRWNRIPKVSGLKRCGKSCRLRWMNYLSPNVKRGDFSAEEEDLIIRLHSLLGNRWSLIAGRVPGRTDNQVKNYWNTRLSRKLGVKEGKTKVSAFPNTLTNIEPKENSNSPSGSNSKSLGPLDCNSSCAGDEVAVEPDNSLQACSLGTQDFKDSMQDTITGEDDFENNLWFSNTAFDLCTPFLSEPFDGLDWPAL 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01349 223 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 4 56 IPR017930 -
Bva06g01349 223 Gene3D - 64 138 - -
Bva06g01349 223 Gene3D - 3 61 - -
Bva06g01349 223 SUPERFAMILY Homeodomain-like 8 103 IPR009057 -
Bva06g01349 223 CDD SANT 12 56 IPR001005 -
Bva06g01349 223 CDD SANT 65 107 IPR001005 -
Bva06g01349 223 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Bva06g01349 223 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Bva06g01349 223 SMART sant 8 58 IPR001005 -
Bva06g01349 223 SMART sant 61 109 IPR001005 -
Bva06g01349 223 MobiDBLite consensus disorder prediction 128 148 - -
Bva06g01349 223 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Bva06g01349 223 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 3 217 - -
Bva06g01349 223 PANTHER TRANSCRIPTION FACTOR WER-LIKE 3 217 - -
Bva06g01349 223 Pfam Myb-like DNA-binding domain 62 105 IPR001005 -
Bva06g01349 223 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01349 Bva-Chr6 10054108 10054960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01349 7 122 MYB Transcription Factor Family AT5G40330 78.448 8.21e-65 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva06g01349 Myb_DNA-binding 1.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01349 K09422 - qsu:112019345 246.514