Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01347 atgaataatttatactGGTTAAAACAAATTTCTAACAACGGCCCCGGCAGGTCAGGTAGAAGGCTTTCCCTCGGGGAATATAAAAGGGCTGTGTCATGGTCCAAGTATTTGGTCTCATCTGGGGCTGCCATAAAAGGGGATGGAGAAGAATGGAGCGCCGACATGTCTCAGCTATATATTGGTTCAAAATTTGCTTCTGGGAGACATAGTAGGATTTATAGAGGCATCTATAAGCAGAGGGATGTCGCCATTAAGCTCATAAGTCAACCAGAGGAAGATGCGGACTTGGCTGTTCAGCTCGAGAACCAATTCAATTCCGAGGTTGCCTTGCTCTTTCGACTGCGCCATCCAAATATTATTACTTTTATTGCAGCTTGCAAGAAACCTCCTGTCTTTTGTATAATTACAGAATATTTGGCTGGGGGTTCGTTGAGAAAATACCTGCAACAGCAAGAACCACATTCAGTTCCACATAAACTTGTTCTAAAATTAGCCCTAGACATTGCAAAGGGGATGCAATATCTTCATTCTCAGGGGATACTTCATAGGGATCTGAAATCAGAAAATCTACTTCTGGGGGAAGATATGTGTGTAAAAGTAGCAGACTTTGGAATCTCATGCTTAGAATCTCAGTGCAGTAGGGACAGTGCCAGAGGCTTCACTGGAACTTACCGTTGGATGGCACCTGAAATGATCAAAGAAAAGCATCATACCAAGAAGGTAGACGTCTACAGTTTCGCCATAGTTCTATGGGAGATTCTAACAGCACAGACGCCATTTGAAAACATGACGCCGGAGCAGGCTGCATTTGCGGTCACCCACAAGAATGCAAGGCCACCGTTGCCACCGGGATGTCCGTTGGCATTTAGTCACCTCATCAACAGATGCTGGTCAAGCAACCCAGATAAAAGGCCGCATTTTGATGAGATAGTTTCCATTCTGGAGAGCTATTGGGAATCCCTTGAGGAGGATCCAGATTTTTTGTCAACTTACAAACCACAACGCACTAATGTTCTTCTCGGATGCTTGACGAAATGTATTGCTGGCCATAGATCCAATGCCTGCAAATGCAAAGCTTA 1079 0.4402 MNNLYWLKQISNNGPGRSGRRLSLGEYKRAVSWSKYLVSSGAAIKGDGEEWSADMSQLYIGSKFASGRHSRIYRGIYKQRDVAIKLISQPEEDADLAVQLENQFNSEVALLFRLRHPNIITFIAACKKPPVFCIITEYLAGGSLRKYLQQQEPHSVPHKLVLKLALDIAKGMQYLHSQGILHRDLKSENLLLGEDMCVKVADFGISCLESQCSRDSARGFTGTYRWMAPEMIKEKHHTKKVDVYSFAIVLWEILTAQTPFENMTPEQAAFAVTHKNARPPLPPGCPLAFSHLINRCWSSNPDKRPHFDEIVSILESYWESLEEDPDFLSTYKPQRTNVLLGCLTKCIAGHRSNACKCKA 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01347 359 Gene3D Transferase(Phosphotransferase) domain 1 140 340 - -
Bva06g01347 359 SMART serkin_6 58 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01347 359 PRINTS Tyrosine kinase catalytic domain signature 222 232 IPR001245 GO:0004672|GO:0006468
Bva06g01347 359 PRINTS Tyrosine kinase catalytic domain signature 285 307 IPR001245 GO:0004672|GO:0006468
Bva06g01347 359 PRINTS Tyrosine kinase catalytic domain signature 241 263 IPR001245 GO:0004672|GO:0006468
Bva06g01347 359 PRINTS Tyrosine kinase catalytic domain signature 136 149 IPR001245 GO:0004672|GO:0006468
Bva06g01347 359 PRINTS Tyrosine kinase catalytic domain signature 174 192 IPR001245 GO:0004672|GO:0006468
Bva06g01347 359 CDD STKc_MAP3K-like 65 314 - -
Bva06g01347 359 Pfam Protein tyrosine and serine/threonine kinase 60 314 IPR001245 GO:0004672|GO:0006468
Bva06g01347 359 PANTHER SERINE-THREONINE PROTEIN KINASE 1 336 - -
Bva06g01347 359 ProSiteProfiles Protein kinase domain profile. 58 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01347 359 Gene3D Phosphorylase Kinase; domain 1 48 139 - -
Bva06g01347 359 SUPERFAMILY Protein kinase-like (PK-like) 44 314 IPR011009 -
Bva06g01347 359 PANTHER SERINE/THREONINE-KINASE HT1-LIKE PROTEIN 1 336 - -
Bva06g01347 359 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01347 Bva-Chr6 10043538 10046755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01347 32 344 MAP Kinase Kinase Kinase AT1G62400 60.559 1.90e-137 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Bva06g01347 PK_Tyr_Ser-Thr 3.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01347 - - tcc:18603894 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01347 06 10043538 10046755 Bva05g00372 05 1850854 1853468 BWGD
Bva06g01347 06 10043538 10046755 Bva06g01347 06 10043538 10046755 ECH