Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01335 ATGAATAAGTTTGACTTCCGTAAATACACAGCTTCTTCGTCATCCTTCGATCTCAGAAAGAAATTCCCATGGTGGTACGAAATCCTCGATCCAGGATCGGAATTCGTCGGCCGATGGTACCGCACATTCCTTGTGGCCTGTCTCGCTGCTCTGTTTCTTGACCCTCTCTATTTCTATTACCCGGTGAATGACGGCGACGCTTGCATCAGAAACGATATTATTCTAGGCATCGCCGTCACCTTTTCGCGCACCGTCACCgatctcttcttcctcttccatATAGTCATCAAGTTCCGTACAGCCTACATTTCTCGCAGGTCTCGCGTTTTCGGCCGCGGTGTGCCCGTGAAGGACCCTCACAAAATCGCCAGGCGATATCTCAAGTCTGATTTCATCCTTGATGTTCTCTGTGCCCTTCCTCTCCCTCAGATTGTAACTTGGTTCGTGATTCCGGCGACGAAGGGTTCCCGTAAAACAGCAGCTCATACTAATCACACACTTTCTTTGATTGTTCTCGTTCAGTATATTCCTCGATTCTTTCAGATTTTTCCGCTGCAACGGCggattataaaaaatagtggGATCATAACCCAGAATGCTTGGGCAGGGGCTGTATATAATCTTGGATTTTACATGCTGGCTAGCCATATTTTAGGAGCTGCGTGGTACCTGTTGTCGATTCAGCGGCAGTATGAATGCTGGAGAATAACTTGTAGGAACGAAATGAATTCGACTAGGTCTCCATCTTGTAATCCCACTTTCCTTGATTGTAGTACTACGACAAATCCTGAACGGGCATTTTGGTTGAGGCGCTCAAAAGTGCTCACTGAGTGCGATCCTACCAATAACAAAGCCGGCTTTCAATTCGGAATGTTTGCTGATGCTTTCGCTGACAATGTTGCTTCATcaaaattcattcaaaaatatttttactgccTCTGGTGGGGTTTGAAAAATCTAAGTTCATATGGACAAAATATTACTACGAGTACTTTCTTTGGTGAAACATTATTTTGCAGCTTCATCTGCTTAGCAGGTCTAGTTCTGTTTGCACATCTCATCGGTAACATGCAGAATTATCTTCAATCTTCAACTGTAAGACTTGAAGAATGGAGAGTTAAACAAAGAGACACAGAGGAGTGGATGAGACATCGCCAACTGCCGCCAGACCTGCAACAACGTGTACGCCAGTTTCTTCGATACAAATGGCTTGCCACTAAAGGTGTTGATGAAGAATCTATCTTGCGCTCTTTGCCTTTGGACCTTCGACGTCAGATTCAAAGGCATCTCTGTCTTGCCCTTGTTCGTAGGGTTCCCTTTTTTGGACAAATGGATGATCAGCTGTTAGATGCGATATGCGAACGCCTTGTGTCATCTTTGAACACAAAAGACACGTATTATTCCCACCAGTGGAGGACTTGGGGTGCTTGCTATATACAAGCTGCGTGGAGACGTTATCACAAGAGAAAAATGGCACTGGAATTGTTAGAGAAAGAGAGCTTGTACTATACAAACTTAACGGAAGATAGAGACATGAATGCAGAAGATGATGAAACAACTGCTGGAGAGAGCTCAAAGGGGGACAGTTCAAGCCATGTACAGGTTCAACATCTTGGGGCAACAGTTTTGGCTTCAAGATTTGCTAAAAACACTAGAAGGGGGGCTGGCGAGAAACTCGCACTCCCTGATTCCAACAGCTTAAAAATGCCTAAGCTGTTTAAACCATCGGATCCTGATTTCTTAGCAGACCATGATGATTA 1760 0.433 MNKFDFRKYTASSSSFDLRKKFPWWYEILDPGSEFVGRWYRTFLVACLAALFLDPLYFYYPVNDGDACIRNDIILGIAVTFSRTVTDLFFLFHIVIKFRTAYISRRSRVFGRGVPVKDPHKIARRYLKSDFILDVLCALPLPQIVTWFVIPATKGSRKTAAHTNHTLSLIVLVQYIPRFFQIFPLQRRIIKNSGIITQNAWAGAVYNLGFYMLASHILGAAWYLLSIQRQYECWRITCRNEMNSTRSPSCNPTFLDCSTTTNPERAFWLRRSKVLTECDPTNNKAGFQFGMFADAFADNVASSKFIQKYFYCLWWGLKNLSSYGQNITTSTFFGETLFCSFICLAGLVLFAHLIGNMQNYLQSSTVRLEEWRVKQRDTEEWMRHRQLPPDLQQRVRQFLRYKWLATKGVDEESILRSLPLDLRRQIQRHLCLALVRRVPFFGQMDDQLLDAICERLVSSLNTKDTYYSHQWRTWGACYIQAAWRRYHKRKMALELLEKESLYYTNLTEDRDMNAEDDETTAGESSKGDSSSHVQVQHLGATVLASRFAKNTRRGAGEKLALPDSNSLKMPKLFKPSDPDFLADHDD 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01335 586 SUPERFAMILY Voltage-gated potassium channels 33 362 - -
Bva06g01335 586 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED 466 582 - -
Bva06g01335 586 Gene3D Helix hairpin bin 367 431 - -
Bva06g01335 586 MobiDBLite consensus disorder prediction 512 533 - -
Bva06g01335 586 Pfam Ion transport protein 39 367 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bva06g01335 586 Gene3D - 71 364 - -
Bva06g01335 586 SUPERFAMILY cAMP-binding domain-like 369 457 IPR018490 -
Bva06g01335 586 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 466 582 - -
Bva06g01335 586 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED 12 466 - -
Bva06g01335 586 MobiDBLite consensus disorder prediction 554 586 - -
Bva06g01335 586 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 12 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01335 Bva-Chr6 9996658 9999562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01335 466 581 Ion Channels AT3G48010 47.934 2.20e-25 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01335 K05391 - gmx:100783672 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01335 06 9996658 9999562 Bva06g01335 06 9996658 9999562 ECH