Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01331 ATGGTGGCAAGATCATGCATGAATTTGTTGGACTTGGTGTCTGGGGACATTTTGGATTTCCCTCCAAGTCCAAGGGCTCTTCCGCGAGTTATGACTGTTCCAGGAGTTATTTCTGATGTAGATGGCAAAGAACGTAGAGATGATGATTTATCCGCTCTCTCATTAGAATACAGTCAAAAGATAATTGTAGTAGCAAATAATCTTCCTCTCAATGCTCAAAAGGATCAAAAATCTGGCAGATGGTGCTTTAGTTATGAtgaagattcaattttttggcAGCTAAAGGATGGACTCCCTTCTAAAACTGTTGTCTATGTAGGATCACTGAATGTTGATGTTGATGCAAGTGAACAAGATAAAGTTTCCCTTGAGTTGATGGAGAAATTCAATTGTCTGCCTACTTTTCTACCTTCAGACCTCCAGAAACAGTTTTATAATGGATTCTGCCAGCAAACTTTGTGGCCTTTATTCCATTACATGCTGCCCATGTACCCAGATTGCTCTCGCTTTGATAGGTCACTGTGGCAGGCTTATGTTTCTGctaacaaaatatttgcaGATAAAGTCAGTGAAGTTATTAATTCAGAATGTGATTATGTATGGGTACATGATTATCAGCTTATGGTTCTGCCAACATTCCTGAGGAAGCGATACCATCGGGTCAAGTTGGGATTTTTTCTCCATAGTCCATTTCCTTCATCAGAAATTTATCGGACTCTGCCGGTTAGAGATGAGATTTTGAAAGCATTGCTTAATGTAGATTTGATTGGATTTCATACATTTGATTATGCTCGTCATTTTCTATCTTGCTGCGGTCGGATGCTTGGCTTGGAACATGAATCCAAAAGGGGTTACATTGGGCTTGAATACTTTGGCCGCACTgtatacattaaaattttgccTGTAGGGATTCATATGGGTCGACTTCAATCTGCTTTGGATCATCCTTCTTCTTCTGTCAAAGGCAGAGAAATCTATGAGCAATTTAATGGGAAAAAGCTTATTCTTGGTGTTGATGATATGGACATATTCAAAGGCATCAGTTTGAAGTTCTTGGCCTTGGAAAAACTCCTGGAGCAGCATCCCTCTCTGCAGGGTGAGTTAATACTGGTCCAAATTATAAATCCCCCAAGGAGCAGTGGCAAAGATGTTGAGGAAGCCAAGAAGGACACACATAGTACTGCCAAAAGGATAAATGAAAGGTTTGGATACCCTGGTTATGAGCCTGTGATTATTATTGATCATCCCATTCCTTTTTATGAGAAGACAGCTTATTATGCTTTGGCAGAATGTTGCATAGTAAATGCAGTGAGGGATGGTATGAATTTAGTTCCGTACAAGTACATTGTCTGTAGGCAGGGAAgtccaaaaatggacgaagccTTGAAAATTGCTTCTGAGTCCCCTCGCACTAGTGCACTTGTTGTCTCTGAGTTTATAGGTTGCTCACCGTCTCTCAGCGGAGCAATAAGGGTGAATCCCTGGAACACTGATGCTGTTTCTGATGCAGTAAATCTGGCCATCACTATGTCCAGTGAAGAGAAGCATTTGCGCCATGAGAAGCACTATCGATACCTTAGCTCTCATGATGTGGCTTACTGGGCCCGGAGTTTTATGCAAGATCTGGAGAGAGCATGCAGGGATCACGATAGTAAACATTACTGGGGCATTGGCTTTGGCATGAATTTCAGGGTCTTGTCTCTTTCTCCTAGTTTTAGGAAGTTATCCATGGAACGCATTGCCTCTGCATATAAGAGGACAAGTCGAAGAGCAATATTTTTGGACTATGATGGTACTATTGTGCCCAAAAATTCCATTGTGAAAAGCCCCAGTCCAGGAGTCATATCTGTTCTAAATAACCTCTGCAGTGATCCTAAGAACACTGTTTTTATAGTAAGTGGCAGGGGGAAGACCTCATTAGGCGAATGGCTCCATCAGTGTAAGGATCTTGGCATAGCAGCTGAGCATGGTTTTTTTATAAGATGGGGCAAACAGTCAAGTTGGGAAACCCGTCATAGAAATACAGATCTTGGTTGGAAAAGGATTGCTGAACCCGTGATGAGACACTACACTGAGGCAACAGACGGGTCCTATATAGAGCCGAAGGAGAGTGCCTTGGTGTGGCACTATTATGATGCTGCTCATGATTTTGGAACTTGGCAGGCCATGGAGTTGTTGGATCACCTCGAAAGTGTCCTTGCAAATGAGCCCGTCGTTGTCAAAAAGGGAAAGCATATTGTTGAAGTTAAGCCACAGGGGATAAACAAAGGATTAGTTGCCGAGCAAGTTCTGTCTACATTAGCCAACGATGGGAAATCACCAGATTTTGTATTGTGCATCGGGGATGATAGATCTGACGAGGATATGTTTGAGAGCATATCAACCAAAGTTTTCCCCGCACCCACAGAAATCTTTGCATGCACAGTCGGGCAAAAGCCAAGCAAAGCTAGGTACTTTCTAGATGATACTGCGGATGTGACGATGTTACTTCATGCGCTCGCTGCTGCTTCAGCACCTAAATCCAAAGGTTGCGCAGAAACCCCTCTTGAAACGGCACAAGTCTATTTCGAAAACATTGCTTG 2582 0.4156 MVARSCMNLLDLVSGDILDFPPSPRALPRVMTVPGVISDVDGKERRDDDLSALSLEYSQKIIVVANNLPLNAQKDQKSGRWCFSYDEDSIFWQLKDGLPSKTVVYVGSLNVDVDASEQDKVSLELMEKFNCLPTFLPSDLQKQFYNGFCQQTLWPLFHYMLPMYPDCSRFDRSLWQAYVSANKIFADKVSEVINSECDYVWVHDYQLMVLPTFLRKRYHRVKLGFFLHSPFPSSEIYRTLPVRDEILKALLNVDLIGFHTFDYARHFLSCCGRMLGLEHESKRGYIGLEYFGRTVYIKILPVGIHMGRLQSALDHPSSSVKGREIYEQFNGKKLILGVDDMDIFKGISLKFLALEKLLEQHPSLQGELILVQIINPPRSSGKDVEEAKKDTHSTAKRINERFGYPGYEPVIIIDHPIPFYEKTAYYALAECCIVNAVRDGMNLVPYKYIVCRQGSPKMDEALKIASESPRTSALVVSEFIGCSPSLSGAIRVNPWNTDAVSDAVNLAITMSSEEKHLRHEKHYRYLSSHDVAYWARSFMQDLERACRDHDSKHYWGIGFGMNFRVLSLSPSFRKLSMERIASAYKRTSRRAIFLDYDGTIVPKNSIVKSPSPGVISVLNNLCSDPKNTVFIVSGRGKTSLGEWLHQCKDLGIAAEHGFFIRWGKQSSWETRHRNTDLGWKRIAEPVMRHYTEATDGSYIEPKESALVWHYYDAAHDFGTWQAMELLDHLESVLANEPVVVKKGKHIVEVKPQGINKGLVAEQVLSTLANDGKSPDFVLCIGDDRSDEDMFESISTKVFPAPTEIFACTVGQKPSKARYFLDDTADVTMLLHALAAASAPKSKGCAETPLETAQVYFENIA 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01331 860 Gene3D - 589 700 IPR023214 -
Bva06g01331 860 Gene3D - 717 845 IPR023214 -
Bva06g01331 860 CDD GT20_TPS 60 543 IPR001830 GO:0003824|GO:0005992
Bva06g01331 860 Gene3D Glycogen Phosphorylase B; 53 310 - -
Bva06g01331 860 Pfam Glycosyltransferase family 20 60 543 IPR001830 GO:0003824|GO:0005992
Bva06g01331 860 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 591 795 IPR006379 -
Bva06g01331 860 CDD HAD_TPP 591 826 - -
Bva06g01331 860 Pfam Trehalose-phosphatase 593 823 IPR003337 GO:0003824|GO:0005992
Bva06g01331 860 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)-RELATED 1 843 - -
Bva06g01331 860 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 547 - -
Bva06g01331 860 Gene3D Glycogen Phosphorylase B; 311 527 - -
Bva06g01331 860 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 843 IPR001830 GO:0003824|GO:0005992
Bva06g01331 860 SUPERFAMILY HAD-like 590 834 IPR036412 -
Bva06g01331 860 TIGRFAM T6PP: trehalose-phosphatase 588 834 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01331 Bva-Chr6 9978780 9984847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01331 1 859 Trehalose Biosynthesis Gene Families AT1G23870 67.436 0.0 1232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01331 K16055 - gmx:100812031 1342.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00383 05 1899922 1905695 Bva06g01331 06 9978780 9984847 BWGD
Bva06g01331 06 9978780 9984847 Bva05g00383 05 1899922 1905695 ECH
Bva06g01331 06 9978780 9984847 Bva06g01331 06 9978780 9984847 ECH