Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01326 ATGGGTCCAACTCCCATCTGGGTCCTCTTTATTGTGATCCTCCTCTTGTTTTCAATGGCCACTTCAGAAGAAGAAGTGGTCAAGGAAGCTCTGGTGAGATTCATGGAAAAACTTGCTCCTGGAAATGGAAATGCACAAAGATGGGGTTGGAAACTAGCATCAGACCCCTGCACTGACGGATGGACTGGTGTGAGATGTGATGGAGACTCCAAATTTGTCAGGCAAATAATTCTTCATGGATTCAATTTCACGGGGACTTTAGACGCCAGTTCTCTTTGCCAAACAGGGTCTCTTCAAGTTCTTGACTTGAAGGTCAACAATTTACAAGGATTGATAGGAGAAGACATAGGGAATTGTAAGTCCTTGACTCACTTGTATTTGAGTGGGAACAAATTCTCCGGGGATCTCCCTGTTTCCCTCGgagagttaaaaaatttaaaaaggctTGATGTTTCAGATAACCGCTTGGCTGGCCAGCTTCCATCTATGAGTCATATTACAGGGCTGGTTTCCTTCCTTGCCCAAGACAACATGTTCAGTGGGGAAATTCCCAGTTTTGAATTCTCCAACCTTGAGGAGTTCAATGTCTCTAACAACAAGTTAATTGGCCCAATTCCTGATGCCATGATCAAGTTCCATGCTGACAGCTTTTCTGGTAATCCTAATTTATGTGGAACACCACTTGGAAATGCCTGTCCTCCTTCTCTCCCATTAATtcacaaggaaaagagaggaTCAATCAGCGAGAGCATTGCTATATATTCAGGTTATGTAATTCTAGGTGTgcttgtctttcttttcttcacctTCCAAATTATAAAGAGATTCAGGACCAAAGAAAAAGCAGTAGATattgaaaagaaggaaaaggagagGGAAACTAGTAGTGACAAGCCTAGTGAAGCTTCTATTGAAGATAAGGAAAGCATTGGGCTAAGATCAGAGTATTCAGTAACATCTCTTGAAAGCGGTATGCCTACATTAACTCTCCTTGTTCTTTCAAGTCCAATGGGAAAATCGTTAAGATTTGAGGACTTGCTTCGAGCTCCTGCTGAATTGGTTGGGAGAGGAATGCACGGAAGCCTCTACAAGGTGATGCTGGACAATGGGTTAATAGTTGCTGTCAAGAGGATCAAGGATTGGGGAATTTCAAGACATGATTTTGAGAGGAGAATGCATAAGGTAGATCAAGTGAAGCATCCATATGTACTACCACCTGTTGCATACTATTGCTCCCAACAAGAGAAGCTCCTGGTCTATGAATATCAGCAGAACGGCAGTCTCTTCAAAATGCTCTCTGGATCTCAGAATGGCCAAAGGTTTGACTGGGGGAGTAGACTAAACGTTGCTGCTAACATAGCTGAGGCCTTGGCATATATGCACGAGGAGCTTTGTGAAGCTGGAATAGCTCATGGTAACTTGAAATCtagtaatattttgtttgacaaGAATATGGATCCGTGCGTCAGCGAATATGGCCTGATGGTGGTTGAAAATCAAGATCCATCTTCCCTTCCTCACAGCAAAGGTTTAAAAAACGGAAATTCAACTGGAGCTCTTGCATACAGCACCTTTATGGTAGATATCTATGCCTTTGGGGTGATCCTTCTAGAGCTACTGACAGGAAAAGTGGTTCAAAATAATGGGTTTGATTTGGCTAAATGGGTGAATTCAGTGGTCAGAGAAGAATGGACTGTTGAAGTTTTTGACAAGTCCCTAATCTCAGAAGGTGCCAGTGAAGAGAGGATGGTGAGCTTGTTGCAGATAGCACTAAAATGCATAAATCCTTCTCCAAGCGACAGACCAAGTATGTGTGAAGTTGCTGTCATGACAATTGCgttgaaagaggaagaagagagatcCATAACCTTTGAACCATA 1880 0.4005 MGPTPIWVLFIVILLLFSMATSEEEVVKEALVRFMEKLAPGNGNAQRWGWKLASDPCTDGWTGVRCDGDSKFVRQIILHGFNFTGTLDASSLCQTGSLQVLDLKVNNLQGLIGEDIGNCKSLTHLYLSGNKFSGDLPVSLGELKNLKRLDVSDNRLAGQLPSMSHITGLVSFLAQDNMFSGEIPSFEFSNLEEFNVSNNKLIGPIPDAMIKFHADSFSGNPNLCGTPLGNACPPSLPLIHKEKRGSISESIAIYSGYVILGVLVFLFFTFQIIKRFRTKEKAVDIEKKEKERETSSDKPSEASIEDKESIGLRSEYSVTSLESGMPTLTLLVLSSPMGKSLRFEDLLRAPAELVGRGMHGSLYKVMLDNGLIVAVKRIKDWGISRHDFERRMHKVDQVKHPYVLPPVAYYCSQQEKLLVYEYQQNGSLFKMLSGSQNGQRFDWGSRLNVAANIAEALAYMHEELCEAGIAHGNLKSSNILFDKNMDPCVSEYGLMVVENQDPSSLPHSKGLKNGNSTGALAYSTFMVDIYAFGVILLELLTGKVVQNNGFDLAKWVNSVVREEWTVEVFDKSLISEGASEERMVSLLQIALKCINPSPSDRPSMCEVAVMTIALKEEEERSITFEP 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01326 626 SUPERFAMILY Protein kinase-like (PK-like) 352 610 IPR011009 -
Bva06g01326 626 SUPERFAMILY L domain-like 50 228 - -
Bva06g01326 626 Pfam Leucine rich repeat 97 156 IPR001611 GO:0005515
Bva06g01326 626 SMART serkin_6 348 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01326 626 Pfam Protein kinase domain 352 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01326 626 PANTHER LRR RECEPTOR-LIKE KINASE 2 625 - -
Bva06g01326 626 Gene3D Phosphorylase Kinase; domain 1 338 422 - -
Bva06g01326 626 MobiDBLite consensus disorder prediction 285 307 - -
Bva06g01326 626 Gene3D Transferase(Phosphotransferase) domain 1 424 624 - -
Bva06g01326 626 Gene3D Ribonuclease Inhibitor 187 235 IPR032675 -
Bva06g01326 626 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Bva06g01326 626 PANTHER OS05G0588300 PROTEIN 2 625 - -
Bva06g01326 626 Gene3D Ribonuclease Inhibitor 27 186 IPR032675 -
Bva06g01326 626 ProSiteProfiles Protein kinase domain profile. 348 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01326 Bva-Chr6 9965931 9968423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01326 6 607 Receptor kinase-like Gene Family AT1G64210 33.871 5.30e-97 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva06g01326 Pkinase 1.5e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01326 - - pvu:PHAVU_009G180700g 788.875