Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01323 atggGTTTGAGGAAGTATGTGTTGGAATCGGTTCCATTTGTAGCAATGGTGATGGTGGAATCCCTCGATGTGGGATTGACCACTCTGAGTAAAGCGGCCATGTCCAGAGGAATGAGCCATTTTGTGTTTGTCGTCTACTCGAATGCCCTCGCTACTTTCATACTCCTCCCCTTCTCTTTCATCTTCGAAAGACATAAAAGACAACCACTTTCTTTCTCGCTTCTTTGTAAATTCTTTCTCCTTAGCCTTGTTGGAATAACTGTGATGCAGAATTGTGTTTTCACCGGTATAAGTTACAGCTCGCCCACTCTTGGATCTGCTATGAGCAACGTGATCCCAGCATTCACTTTTGTACTAGCAGTTATTTTCAGGATGGAGAAGTTAGATATTAAAAGCTCGAGAAGCCAGATCAAAATATTAGGCACGGTGGTGTCGATCGCAGGAGCATTAATCGTGACCCTTTATAAGGGCAGCCCCATTGGTGGGTCTCAAAGTGCATCTCCTAATACGTTGAAAGAAACTAGTAACTGGGTTATTGGAGGCCTCTTCCTTGCAACTGCAAGTTTATCTCTTGCAGTCTGGAATACTGCTCAGGCAGCAATTCTTAAAGGATATCCGTCACAATCGACCATTGTCGCCTTCTATTGCTTGTTTGGAACCATCCAATGTGCCATACTTTCTCTGATTGTAGTCAGAGATCCAAATGCTTGGAGACTTAAGCCTGATATTGAGCTTGTTGCTATCTTCTATTCAGCAATTTTTGGAAGTGTGGTAACGTTTTCTGTGCTTACTTGGTGTATTCATAAGAAAGGGCCAGTCTTTGTTGCTATGTTTAAACCCGTTGGAATTGCCATTGCTGCCTTGATGGGTGTTATCTTCCTTGGTGACACACTCCATGTTGGCAGTATCATTGGAGCACTAGTGATTGTTATAGGATTTTACGCAGTATTATGGGCACAAtccaaagacaaaaatggggAGTACCACAAAGTTGATAGACCATCATCCTCCTCCTCGTCGCAAAGGAGCCTTCTACAGAGTCGTCATGAAGAAACGAGTATTTTGGAATA 1070 0.4215 MGLRKYVLESVPFVAMVMVESLDVGLTTLSKAAMSRGMSHFVFVVYSNALATFILLPFSFIFERHKRQPLSFSLLCKFFLLSLVGITVMQNCVFTGISYSSPTLGSAMSNVIPAFTFVLAVIFRMEKLDIKSSRSQIKILGTVVSIAGALIVTLYKGSPIGGSQSASPNTLKETSNWVIGGLFLATASLSLAVWNTAQAAILKGYPSQSTIVAFYCLFGTIQCAILSLIVVRDPNAWRLKPDIELVAIFYSAIFGSVVTFSVLTWCIHKKGPVFVAMFKPVGIAIAALMGVIFLGDTLHVGSIIGALVIVIGFYAVLWAQSKDKNGEYHKVDRPSSSSSSQRSLLQSRHEETSILE 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01323 356 Pfam EamA-like transporter family 25 153 IPR000620 GO:0016020|GO:0016021
Bva06g01323 356 Pfam EamA-like transporter family 179 317 IPR000620 GO:0016020|GO:0016021
Bva06g01323 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Bva06g01323 356 MobiDBLite consensus disorder prediction 332 356 - -
Bva06g01323 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 322 - -
Bva06g01323 356 PANTHER WAT1-RELATED PROTEIN 9 343 IPR030184 GO:0016021|GO:0022857
Bva06g01323 356 PANTHER WAT1-RELATED PROTEIN 9 343 - -
Bva06g01323 356 MobiDBLite consensus disorder prediction 327 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01323 Bva-Chr6 9954998 9957151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01323 4 325 Nodulin-like Gene Family AT5G40240 46.246 4.50e-93 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01323 - - jre:108991175 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01291 08 6732649 6735487 Bva06g01323 06 9954998 9957151 ECH
Bva06g01323 06 9954998 9957151 Bva06g01323 06 9954998 9957151 ECH