Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01299 ATGCTAGGGAAAATCCTTTCATCGGAGATGGCTACAGTTGCCAATGTTTTCAGGCCGAATTTTCCGCAAGCACTAGAGAAACCGCCTTCTGGTTCAGGGGAATTGCATGTTCTCGCCGTTGACGATAGTCATGTGGATCGTAAGGTCATAGAACGGTTGCTAAAAATCTCATCTTGTAAAGTGACAGTGGTAGACAGTGGAACCCGAGCTCTACAATATCTGGGGTTGGATGGAGAAAAGAGCTCCATTGGGTTCGATAGTGTGAAGGTTAATCTGATAATGACAGACTATTCCATGCCAGGGATGACAGGATATGAACTTCTAAAGAGGATTAAAGAGTCGTCAATTTTTAGAGAGATCCCGGTGGTGATTATGTCCTCTGAGAACATATTGACTCGAATTGATAGTTGCTTGGAGGAAGGAGCGGAAGATTTTCTGTTGAAGCCAGTGAAATTGTCTGACGTGAAACGCTTAAAAGATTGCATTATGAAAGGTGAAGGGAAGAAAAGTGGAGAGAAAGGATCTCAGAAAAGAAGACGATCAGATGACTACAGTCCATCTCGATCAACTCCATTATCGCCTGCATTGTCCTCTAAGAAATCTAGATTATG 611 0.4288 MLGKILSSEMATVANVFRPNFPQALEKPPSGSGELHVLAVDDSHVDRKVIERLLKISSCKVTVVDSGTRALQYLGLDGEKSSIGFDSVKVNLIMTDYSMPGMTGYELLKRIKESSIFREIPVVIMSSENILTRIDSCLEEGAEDFLLKPVKLSDVKRLKDCIMKGEGKKSGEKGSQKRRRSDDYSPSRSTPLSPALSSKKSRL 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01299 203 ProSiteProfiles Response regulatory domain profile. 36 163 IPR001789 GO:0000160
Bva06g01299 203 SUPERFAMILY CheY-like 34 157 IPR011006 -
Bva06g01299 203 Pfam Response regulator receiver domain 37 155 IPR001789 GO:0000160
Bva06g01299 203 PANTHER TWO-COMPONENT RESPONSE REGULATOR 22 195 IPR045279 GO:0009736
Bva06g01299 203 SMART REC_2 35 162 IPR001789 GO:0000160
Bva06g01299 203 Gene3D - 35 199 - -
Bva06g01299 203 CDD REC_typeA_ARR 37 158 - -
Bva06g01299 203 MobiDBLite consensus disorder prediction 165 185 - -
Bva06g01299 203 MobiDBLite consensus disorder prediction 165 203 - -
Bva06g01299 203 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-LIKE PROTEIN 22 195 - -
Bva06g01299 203 MobiDBLite consensus disorder prediction 186 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01299 Bva-Chr6 9834684 9836717 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01299 35 178 Response Regulator Gene Family AT5G62920 81.250 4.34e-79 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva06g01299 Response_reg 1.5e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01299 K14492 - gmx:100796843 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01081 11 12218132 12219850 Bva06g01299 06 9834684 9836717 BWGD
Bva06g01299 06 9834684 9836717 Bva05g00406 05 2007632 2010042 ECH
Bva06g01299 06 9834684 9836717 Bva06g01299 06 9834684 9836717 ECH