Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01291 ATGTCTCACACTAGCTCCGCCGCAGATTCAATCGCATCCAGCGAAGGAGATGGCGCCGCTACCGGCTCCGGAGAGTTCATGCTGTTTGGGGTTAGAGTGGTTGTTGATTCGATGAGAAAGAGTGTCAGCATGAACAATCTCTCGCAGTACGAGCTTCCTCAGGATGCCTCAAACAACAATAACAGCAACAAAGAAGACGCTCTTGCCGCCGGTTACGCTTCCGCCGATGATACCGTTGCTCACAATTCCGGCAGGCATCGCGAGCGTGAGCGTAAGCGAGGGGTTCCATGGACGGAGGAAGAGCACAAGTTGTTCTTGCTGGGATTGCAGAAAGTGGGGAAAGGGGATTGGAGAGGGATCTCCAGGAATTACGTGAAAACCAGGACGCCGACACAGGTTGCTAGCCACGCTCAGAAATACTTTCTCCGACGGTGCAATCTTAATCGGCGACGCCGTAGATCAAGCCTCTTTGACATCACCACCGACACgGTCGGGGCGATCCCAATGGAAGAAGAACAGATCCAGCGTCAAGATAACATGTCTCATTCACATCCTATGTGTCCTGTAACCCCTGAAACAAGCAATCTTAATGGATTTCCTATGACGTCAGTATATCCAATGGCTGTTGGTTCTGGCATGATTTCAGTGCCGGTTGGGAATACagtaaaaaatttcacttttgGACAAGGAAATGTGGAGAACAATGGATCAACCAAGCTAGTCCGTCCAATTCCTGCTGTTCCAAATCCTAAAGCTTCAACAGTCTCTGATATCACCTCCAGCTCGAGTTCAGCTATGGAACCACCAACACTGTCTCTCAGGTTATCTTTGTCATCTGGTCAGAGGGAGACATCGTCAAGGCATTCAGCTTTACATGCAATCCCAAGTTTCAACAATGGAGATAGCATTATAAGTGTTGCTTA 923 0.4832 MSHTSSAADSIASSEGDGAATGSGEFMLFGVRVVVDSMRKSVSMNNLSQYELPQDASNNNNSNKEDALAAGYASADDTVAHNSGRHRERERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRRCNLNRRRRRSSLFDITTDTVGAIPMEEEQIQRQDNMSHSHPMCPVTPETSNLNGFPMTSVYPMAVGSGMISVPVGNTVKNFTFGQGNVENNGSTKLVRPIPAVPNPKASTVSDITSSSSSAMEPPTLSLRLSLSSGQRETSSRHSALHAIPSFNNGDSIISVA 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01291 307 MobiDBLite consensus disorder prediction 252 270 - -
Bva06g01291 307 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 18 307 - -
Bva06g01291 307 CDD SANT 96 141 IPR001005 -
Bva06g01291 307 SMART sant 93 143 IPR001005 -
Bva06g01291 307 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 92 143 IPR006447 GO:0003677
Bva06g01291 307 MobiDBLite consensus disorder prediction 75 95 - -
Bva06g01291 307 Gene3D - 95 147 - -
Bva06g01291 307 PANTHER KIN2 18 307 - -
Bva06g01291 307 SUPERFAMILY Homeodomain-like 91 143 IPR009057 -
Bva06g01291 307 Pfam Myb-like DNA-binding domain 96 141 IPR001005 -
Bva06g01291 307 MobiDBLite consensus disorder prediction 80 95 - -
Bva06g01291 307 MobiDBLite consensus disorder prediction 236 270 - -
Bva06g01291 307 ProSiteProfiles SANT domain profile. 92 146 IPR017884 -
Bva06g01291 307 ProSiteProfiles Myb-like domain profile. 89 141 IPR001005 -
Bva06g01291 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 145 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01291 Bva-Chr6 9794285 9796725 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva06g01291 Myb_DNA-binding 1.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01291 - - aip:107632799 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01073 11 12167281 12168837 Bva06g01291 06 9794285 9796725 BWGD