Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01285 ATGGATCCTCCACTCATCAACGAGTCTATATTCTCTCCCGCTAACCCATCTGCTTACAGTTTGGCTGCGATTTGGCCTTTCAATGGCGAACCGAATAGTGGAGGATTGGGCCTCCGAATGGGTAATTTGGGTCAGAACTTGGGTGGATTTGCTGACACTTTAATACATCGAGATAGGTCGGCGGAGGAATCAACAATCACGGAGCAGAGTGGTGGTGCCGGTGGAAAtccaagaaagagaaagaatgcCAGTTCGGAGGACGAGTCATCAAAGATGGTTTCGACTAGTAGCAACAATGAATTGAATGATTCTGGGAATAAACGGGTAAAATTAGGAGGATGCGGGGATGAAAATAGTGGAGTGAAAGCTGAAGCAGAAACAAGTTCAGGAGGTGGTAACAAGTCAGGCGGTCAAGGTAGTAAACCTTCGGAGACACCTAAGCAAGACTATATACATGTGAGAGCAAGAAGGGGCCAAGCTACCGATAGCCACAGTCTTGCAGAAAGAgcaaggagagaaaaaatcaGCGAGCGgatgaaaattctgcaagatTTGGTCCCAGGATGTAACAAGGTAATTGGCAAAGCACTTGTCCTGGAtgagataataaattacaTCCACTCTCTCCAGAGTCAGGTTGAGTTCCTATCCATGAAGCTCGAAGCCGTAAGTTCAACATTGAACATGAACCCTACCATTCAATA 704 0.4219 MDPPLINESIFSPANPSAYSLAAIWPFNGEPNSGGLGLRMGNLGQNLGGFADTLIHRDRSAEESTITEQSGGAGGNPRKRKNASSEDESSKMVSTSSNNELNDSGNKRVKLGGCGDENSGVKAEAETSSGGGNKSGGQGSKPSETPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIHSLQSQVEFLSMKLEAVSSTLNMNPTIQ 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01285 234 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 159 209 IPR011598 GO:0046983
Bva06g01285 234 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 157 228 IPR036638 GO:0046983
Bva06g01285 234 CDD bHLH_AtBPE_like 149 232 - -
Bva06g01285 234 MobiDBLite consensus disorder prediction 88 105 - -
Bva06g01285 234 MobiDBLite consensus disorder prediction 60 146 - -
Bva06g01285 234 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 227 IPR024097 GO:0006355
Bva06g01285 234 SMART finulus 165 215 IPR011598 GO:0046983
Bva06g01285 234 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 1 227 - -
Bva06g01285 234 Gene3D - 156 232 IPR036638 GO:0046983
Bva06g01285 234 MobiDBLite consensus disorder prediction 122 145 - -
Bva06g01285 234 Pfam Helix-loop-helix DNA-binding domain 163 210 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01285 Bva-Chr6 9763693 9766381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01285 1 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 57.500 1.87e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva06g01285 HLH 3.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01285 - - zju:107418528 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01285 06 9763693 9766381 Bva05g00421 05 2078952 2081975 ECH
Bva06g01285 06 9763693 9766381 Bva06g01285 06 9763693 9766381 ECH