Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01279 ATGTCCGAAGGATCTTCCCCTCCTCATCCGATTTCCGGCGAACGATCCTCACCTGAACCCAATTCCCAAAACCACGTCCCCGATTCCGCTAACAAAACCCCCACTCCCAAAGAGGAGACTACTACAGCTCCCGCGCCCGCCCCCACCACCACAAGGAGCAACCGCCCCTCTCGCGCGTGCACCATTCGCGCTGCTTCTCGTCTCTATTCAACAGGGCAGCCGGCGATCGAACGGAAGCCAAAAGCtgcaaagaaggaaaagcgGCAGGACGAGTCGCCACAGCAGCAGCAATGCAGCAAGATCATCACGCCGCTTGTGGAACCGCCCCCACCTGCACAGTTGCCTCGATGGAACCTGCGGTCCATGTGGGAGTTAGCTTCCGTACTCAATTTCTTGCATGTATTTAGGCCTCTTTTGAATATCTCAGTAGAATTCTCGGCTGAGGAGTTCGAGACAGCTCTCCTCACGCCCAATGATACATTGAGTGATATACATATGCCCTTGCTAAAgGCAATCCCTCCCATTACGCGAATGGCACTCACCCGTGATACTTGGATCACTGTATTATGCAGAAAATTGAGAGATTGGTGGCAGTGGGTTGCTGAAGGGGATCTTCCAATTGTTGCTTCACATGGGGCGGAGATTGAAGCATATAGATCGCTTGATCCAGGGGTCCGTGTGGTTATCTTGAAAGCATTATGTGACATTCGTGTTGAGCAAGAAGATATACGAAGCTATATTGACAACTCACTCAAACATGGTGTTCAATTTTCAACATTCCGTAAAGAGCGTATAGGTGGTGATTCACAGGGGATTTCTTACTGGTGTGAAGATGATCCAATTATTGGTCATAGGTTGTATCGGGAAATTAGGAAAACTGAAGTGAAGGAAGTtaagaaagggaaaacaaaagGTTCCCAGGTCCTTCCCTGTACAACATACCAGTGGGAAGCAGTTGCTactaattttgatgaatttcaaGATGTTTCTGAGAAGCTTTTCTCAAGTAAAAACAGAACAGAGGCTTCTCTGGGGAAAAAGCTGAAGAATGACATGCTTCCTGAGATTGAGAAAGTTCATAAGAGGAAAGAGAGATTGCTGAAAAAGCAACATAGACAAGCTCTTCTTCTTGATAATTTCTTGGGTGTTGATGGGCTTGCTCCTGGGCGTTCACTTCGTGATAGGAAACCTGTAACCTACACGTTTGATGATTATGATCGGTCAATCAATGAGGCAATCAAGATAACCAAaAAGAAACAACCATCCCCAGAACCTATACCTAGGAGGGAAGCGGTAGCTAAACCTGAAGCTTTAACTAATGGTAAATGGAATGGGTCTTCGATTGCccctcaaaatcaaaatacgAGCTTTCATATGTCGTCTCCAAAATCACCCGATTATGATGATGgtgaggaggaggaggaagatcACAGAAATGAAGAATTGGATCGAAGCAATCGACGGAGACAGAGGCCTCAGCGGTACTCAGAGAAAGAGTTTGTGGAAGTAATGTCAGATAATGACGCGGACTTTGACAGCGATGATGATATTGTTGGAGAAGCCGTATATGATGAGGAATATCTAAGGAAACGGAAGCAGAGGAGGAAGCTTTCTAGTAGCTCTGAAGGAGATGAAGAGTATCAGTGGGATGAAGAAAATgtcgaagaagaagaagatgatgatgatgaagattcCTTGAGTATCAGTGAGGATAGTGATGAACCCCGGAAATTAAAGAAGTTGCCTGGCCGTACTAGAAGGGAAACTAAACTCAGGTCTGTAGGTGAGATTCAATCAGGTCTAAGACGGAGTAAGAGGGCCACCAGAAATCGGATAAATTACCGACAATATGAGATGGATTCTGAATCCGAAAACGAATCTATGAAGCCTGAGAAATCTAATGGAACAGACGAACACTCAGAAGCCAGTGAGAATGGAGGAGAATATATGATGGAAAGTGAAGATTCAGATGGCCATTATGATCGTCATCAGGATCAGGAAATGAAAGTAGAAAATCATGTTACTCATCCAGAAAttcaagagaaagaggaaaaccAGCCTCCTGAAAATTCAAGTAGTCCTGGTCAGGAGGAGGTGGAGGGCATGGGAAAAAGACGTTTCCTCGATTTGAATGAGCTTGCCCCGAGTTCTGGTTTTGACGATGGTCCAAATACGATAATGAAAGACGAAGACAAAGATGATTACTG 2207 0.4255 MSEGSSPPHPISGERSSPEPNSQNHVPDSANKTPTPKEETTTAPAPAPTTTRSNRPSRACTIRAASRLYSTGQPAIERKPKAAKKEKRQDESPQQQQCSKIITPLVEPPPPAQLPRWNLRSMWELASVLNFLHVFRPLLNISVEFSAEEFETALLTPNDTLSDIHMPLLKAIPPITRMALTRDTWITVLCRKLRDWWQWVAEGDLPIVASHGAEIEAYRSLDPGVRVVILKALCDIRVEQEDIRSYIDNSLKHGVQFSTFRKERIGGDSQGISYWCEDDPIIGHRLYREIRKTEVKEVKKGKTKGSQVLPCTTYQWEAVATNFDEFQDVSEKLFSSKNRTEASLGKKLKNDMLPEIEKVHKRKERLLKKQHRQALLLDNFLGVDGLAPGRSLRDRKPVTYTFDDYDRSINEAIKITKKKQPSPEPIPRREAVAKPEALTNGKWNGSSIAPQNQNTSFHMSSPKSPDYDDGEEEEEDHRNEELDRSNRRRQRPQRYSEKEFVEVMSDNDADFDSDDDIVGEAVYDEEYLRKRKQRRKLSSSSEGDEEYQWDEENVEEEEDDDDEDSLSISEDSDEPRKLKKLPGRTRRETKLRSVGEIQSGLRRSKRATRNRINYRQYEMDSESENESMKPEKSNGTDEHSEASENGGEYMMESEDSDGHYDRHQDQEMKVENHVTHPEIQEKEENQPPENSSSPGQEEVEGMGKRRFLDLNELAPSSGFDDGPNTIMKDEDKDDY 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01279 735 MobiDBLite consensus disorder prediction 570 593 - -
Bva06g01279 735 MobiDBLite consensus disorder prediction 78 93 - -
Bva06g01279 735 MobiDBLite consensus disorder prediction 522 543 - -
Bva06g01279 735 Pfam DDT domain 127 172 IPR018501 -
Bva06g01279 735 MobiDBLite consensus disorder prediction 440 462 - -
Bva06g01279 735 MobiDBLite consensus disorder prediction 544 569 - -
Bva06g01279 735 MobiDBLite consensus disorder prediction 652 685 - -
Bva06g01279 735 PANTHER REMODELING AND SPACING FACTOR 1 32 734 IPR028938 GO:0006355|GO:0031213
Bva06g01279 735 MobiDBLite consensus disorder prediction 1 110 - -
Bva06g01279 735 MobiDBLite consensus disorder prediction 1 68 - -
Bva06g01279 735 PANTHER DDT DOMAIN-CONTAINING PROTEIN DDR4 32 734 - -
Bva06g01279 735 MobiDBLite consensus disorder prediction 506 521 - -
Bva06g01279 735 MobiDBLite consensus disorder prediction 434 735 - -
Bva06g01279 735 MobiDBLite consensus disorder prediction 611 645 - -
Bva06g01279 735 MobiDBLite consensus disorder prediction 479 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01279 Bva-Chr6 9737314 9743807 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Bva06g01279 DDT 7.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01279 - - zju:107418497 979.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00427 05 2103124 2109333 Bva06g01279 06 9737314 9743807 BWGD
Bva06g01279 06 9737314 9743807 Bva06g01279 06 9737314 9743807 ECH