Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01274 ATGACCCTTAAGGGTGGCACAACCCAGGCCTGTGCTGCCTGCAAATTCCAGAGAAGAAAGTGCACTCCCGAATGCCTTCTGGCTCCATACTTCCCTTCTGACCAACCAAAGGTGTTTCAGAATGTCCACAAGCTATTTGGGGTCAGCAACATCGTAAAGATATTAAGGGCTATGGAGCCTAGCCAGAGGAAAATAGCAATGGACTCTCTCATTTGTCAAGCAAACATCAGGGACAAATATCCTGTCCATGGATGCTGCGAGGAAATCTGTCGACTGCGTTACCAGATACGACAGCTGGAAGAAGAGCTTCATATTGTTCAGCAACAACTTGAGATTTATCGACAACATTATCACCAGCAACCTGCGGGATCATCAATCACTGATGATGTCACACTTCCACTCTTCAATCATGGTCCAAGCCCACAGGGTTACCCTGCAATGGCTGCTGCTTTGCCTGTATCACTGCAGCAATATTCTTATGATTCCAGTGTTGAAAGTGTGGCTTACAACTCCATTTACATGGATTCCAAGGATGTTAATATCTCAAACCCTTTGTGGGTTCAACACCCATACGGAAATAACAATGTCAATGCGACGGCAATGCAGTCTCAATTGGTTCCCTCCATTGGCCAAAAAGGACTTGAAGATTATGATGAGATGCATCCAATTTTCGACACAATTGACGATAGACAATCATACGTTTATTCTAAGGAGGCTCATGAATCAAgTACTTCAGAAGAATCAATGAAAGATACAAGAAAGTGCATTGAGCATGTGGGTGAGAATGAATTGAAGAGTGCCGCCGCCTGCTTCAGCCTTACCAGCGTTAGCTG 833 0.4466 MTLKGGTTQACAACKFQRRKCTPECLLAPYFPSDQPKVFQNVHKLFGVSNIVKILRAMEPSQRKIAMDSLICQANIRDKYPVHGCCEEICRLRYQIRQLEEELHIVQQQLEIYRQHYHQQPAGSSITDDVTLPLFNHGPSPQGYPAMAAALPVSLQQYSYDSSVESVAYNSIYMDSKDVNISNPLWVQHPYGNNNVNATAMQSQLVPSIGQKGLEDYDEMHPIFDTIDDRQSYVYSKEAHESSTSEESMKDTRKCIEHVGENELKSAAACFSLTSVS 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01274 277 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 7 224 - -
Bva06g01274 277 Coils Coil 96 116 - -
Bva06g01274 277 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 224 - -
Bva06g01274 277 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Bva06g01274 277 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01274 Bva-Chr6 9717065 9718296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01274 1 239 AS2 family AT3G47870 37.785 7.25e-46 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva06g01274 LOB 5.9e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01274 - - lang:109357116 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01274 06 9717065 9718296 Bva05g00433 05 2137245 2138595 ECH
Bva06g01274 06 9717065 9718296 Bva06g01274 06 9717065 9718296 ECH