Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01270 atgggTATGGATTACTATAATATACTGAAAGTGAATCGAAATGCCAGTGACGACGATTTGAAGAAAGCGTACAGGAGGCTCGCAATGATATGGCATCCTGACAAGAACCCAGTAAACAAAAGTGAAGCTGAGGCCAAATTCAAGCAAATTTCCGAAGCTTATGACGTTTTGAGCGACCCCCAGAAGCGTCAGATCTACGATCTCTACGGCGAGGAGGCCCTCAAATCTGGTCAATTACCACCATCCTCTTCTTCGTCATCGTCTTCTCGTGCTTACCAGCATTTCCCACACCAGCAGCGCCAGCATCCCACATCGTTCCGCTTCAATCCCCGGGACGCCGATGACATTTACGCCGAGTTTTTTGGGTCGGAAAGTACGAGTAGCGGTGCTGGCAGCAGCGGTGCGAGAAACGGAGGGCATAGAGATGGATTCTTTAGGACATCTAATGGTTCGGCCTTTGGAGGAACGGGCAGGAAGGCGCCGGCGGTGGAGAGTATTTTGCCCTGTAGCTTAGAAGAGCTTTACAAAGGtgtgaagaaaaagatgaagatcTCAAGGATTGTCTATGACGCTTTTGGTAAGTCACGTAACGTGGAGGAGATATTGACCATTGACATAAAACCTGGTTGGAAGAAAGGAACAAAGATTACATTCCCCGAGAAGGGTAACCAGGAGCCGGGTGTTACGCCAGCAGATCTTATCTTTGTGGTAGACGAGAAGCCACATGCTGTTTATAGGAGGGAAGGCAACGACCTGGTGATCAACCAGGAGATAACTCTTCTGGAAGCTCTCACAGATATCGTCAAACCTGGTGCCGAGGTTGTCGTCCCTAATGAAGGAATGCCCATCTCAAAAGAGCCTGGAAGGAAGGGGAATTTGAGAATCAAGTTTGACGTAAAGTATCCATCGAGATTAACTCCAGATCAGAAATCTGATCTGAGGAGAGTTTTGGGTGGAATCTCATG 965 0.4694 MGMDYYNILKVNRNASDDDLKKAYRRLAMIWHPDKNPVNKSEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEALKSGQLPPSSSSSSSSRAYQHFPHQQRQHPTSFRFNPRDADDIYAEFFGSESTSSGAGSSGARNGGHRDGFFRTSNGSAFGGTGRKAPAVESILPCSLEELYKGVKKKMKISRIVYDAFGKSRNVEEILTIDIKPGWKKGTKITFPEKGNQEPGVTPADLIFVVDEKPHAVYRREGNDLVINQEITLLEALTDIVKPGAEVVVPNEGMPISKEPGRKGNLRIKFDVKYPSRLTPDQKSDLRRVLGGIS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01270 321 MobiDBLite consensus disorder prediction 77 106 - -
Bva06g01270 321 Gene3D - 162 240 - -
Bva06g01270 321 SMART dnaj_3 3 62 IPR001623 -
Bva06g01270 321 CDD DnaJ_C 163 305 - -
Bva06g01270 321 CDD DnaJ 4 59 IPR001623 -
Bva06g01270 321 Gene3D DnaJ domain 2 133 IPR036869 -
Bva06g01270 321 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Bva06g01270 321 Pfam DnaJ domain 4 67 IPR001623 -
Bva06g01270 321 Pfam DnaJ C terminal domain 165 302 IPR002939 -
Bva06g01270 321 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 320 - -
Bva06g01270 321 PRINTS DnaJ domain signature 62 81 IPR001623 -
Bva06g01270 321 PRINTS DnaJ domain signature 24 39 IPR001623 -
Bva06g01270 321 PRINTS DnaJ domain signature 6 24 IPR001623 -
Bva06g01270 321 PRINTS DnaJ domain signature 42 62 IPR001623 -
Bva06g01270 321 SUPERFAMILY HSP40/DnaJ peptide-binding domain 245 311 IPR008971 GO:0006457|GO:0051082
Bva06g01270 321 MobiDBLite consensus disorder prediction 73 108 - -
Bva06g01270 321 Gene3D - 265 318 - -
Bva06g01270 321 PANTHER BNAA06G20720D PROTEIN 2 320 - -
Bva06g01270 321 SUPERFAMILY HSP40/DnaJ peptide-binding domain 167 242 IPR008971 GO:0006457|GO:0051082
Bva06g01270 321 MobiDBLite consensus disorder prediction 124 149 - -
Bva06g01270 321 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Bva06g01270 321 SUPERFAMILY Chaperone J-domain 3 79 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01270 Bva-Chr6 9692160 9694921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01270 5 74 C2H2 Transcription Factor Family AT1G74250 37.838 2.20e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01270 K09510 - gmx:100781572 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01270 06 9692160 9694921 Bva05g00437 05 2161227 2163910 ECH
Bva06g01270 06 9692160 9694921 Bva06g01270 06 9692160 9694921 ECH