Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01269 ATGGATAATCAAAGTCGCGTCCCGCAAGGTAACGTCAAATTACCTTTCTACCCCGATTGGTTCGTTGtatttgttgttgtttggTTGCACTCATTTCTATCCTCGAACTCAAATTTGCGTGAGAGAAAGTTGGAGAAGAAGATGGGGGACAAGCCAGAAGTACTGGACGCTGTGTTGAAGGAAACTGTGGATTTAGAGAACATCCCTCTTGAGGAGGTTTTTGAGAATCTGAGATGTAGCAGAGAAGGTCTCAGCAGTGAGGCTGCTGAGGAGAGACTACGTATTTTTGGGCATAACAAACTCGAAGAGAAAAagGAGAGAAAATTTCTCAAGTTCTTGGGATTTATGTGGAATCCTCTGTCTTGGGTTATGGAGGCTGCTGCTATAATGGCAATTGCACTTGCTAATGGAGGGGGGAAGCCTCCGGACTGGCAAGATTTTGTAGGTATCATCACCCTGCTTCTCATCAATTCAACTATCAGTTTCATTGAGGAGAACAATGCAGGTAACGCTGCAGCTGCTCTGATGGCTCGTCTCGCTCCAAAAGCAAAGGTTCTTCGAGATGGTAGGTGGAGTGAACAAGATGCTGCGGTACTGGTTCCCGGTGACATAGTCAGTGTCAAACTCGGAGATATTATACCTGCTGATTCTCGTCTTCTTGAAGGGGATCCATTGAAAATTGATCAGTCTGCACTTACTGGAGAGTCCCTGCCAGTGACGAAGGGCCCAGGTGACGGTGTATATTCTGGTTCTACCTGCAAACAAGGAGAGATTGAAGCTGTAGTCATCGCTACTGGCGTTCATACCTTCTTTGGAAAAGCTGCTCACCTTGTAGACACCACGAATCAAGTGGGCCACTTCCAAAAGGTCTTGACTGCAATTGGGAACTTTTGCATATGTTCAATTGCTGTGGGGATGATTGTAGAGATTATTGTTATGTATCCCATCCAAGACCGAGAATATCGCCCTGGAATTGATAATCTTCTTGTACTTCTTATCGGGGGAATTCCCATTGCCATGCCTACGGTCCTCTCAGTGACCATGGCCATTGGCTCTCATAGGCTATCTCAGCAGGGAGCTATCACAAAGAGGATGACGGCTATAGAAGAGATGGCAGGCATGGATGTGCTTTGCAGTGATAAGACTGGAACTTTAACATTGAACAAGCTTAGTGTTGACAAAAATCTTATCGAGGTTTTTGCAAAAGGAGTGGATCCAGATACGGTTGTTTTGATGGCTGCTAGAGCCTCAAGAACTGAGAATCAAGATGCAATTGATTCTGCCATAGTTGGGATGCTGGCTGATCCGAAGGAGGCACGTGCTGGTATTCGAGAAGTACATTTTCTGCCTTTCAATCCTACTGACAAGCGGACAGCATTGACTTATATTGACAGTGATGGTAAAATGCATAGAGTAAGCAAAGGTGCACCGGAGCAGATTCTTAATCTTGCGCACAATAAGTCAGACATCGAGCGTAGAGTGCATGCAGTTATAGATAAATTTGCAGAGCGAGGTTTGCGATCTCTTGCTGTAGCATACCAGgAGGTTCCAGAGGGAACAAAAGAGAGTCCTGGAGGTCCATGGCAGTTTGTTGGTCTTATGCCTCTCTTTGACCCACCTAGGCATGATAGTGCAGAAACAATCCGCAGGGCACTTAACCTTGGAGTGAATGTGAAAATGATTACAGGGGATCAGCTAGCTATTGGAAAAGAAACAGGCCGTCGCTTGGGAATGGGTACCAACATGTATCCCTCATCTGCATTACTTGGGCAGGATAAGGATGAGTCCATTGCTGCCTTGCCTATTGATGAACTGATAGAAAAAGCTGACGGATTTGCTGGTGTTTTTCCTGAGCACAAGTATGAGATTGTTAAACGCTTGCAAGCTAGGAAACATATCTGTGGAATGACTGGTGATGGAGTGAATGATGCGCCTGCTCTTAAAAAGGCGGACATTGGTATAGCTGTTGCTGATGCGACTGATGCAGCTCGTAGTGCGTCTGACATTGTTTTGACAGAACCTGGCCTCAGTGTTATCATTAGTGCTGTGTTGACTAGTCGGGCTATCTTCCAGAGAATGAAAAACTATACAATCTATGCAGTATCAATTACAATTCGTATTGTgCTTGGTTTCATGTTGCTTGCTCTCATATGGAAGTTTGACTTTCCACCTTTTATGGTCCTCATTATTGCTATCCTAAATGATGGTACTATAATGACAATTTCGAAAGATCGGGTAAAACCTTCTCCCCTGCCAGATAGCTGGAAGCTTGCAGAGATATTTACCACTGGCATTGTACTGGGAAGTTACTTGGCAATGATGACAGTCATATTCTTTTGGGCAGCATACAAGACAGATTTCTTCCCGAGAGTATTTGGGGTCTCAACTCTTGAAAAAACTGCTCATGATGATTTCCGAAAACTTGCATCTGCCATCTATCTGCAAGTGAGCACTATTAGTCAGGCCCTTATATTTGTTACTCGGTCCCGAGGCTGGTCTTATGTTGAGCGACCTGGTTTTTTGCTGGTGGCTGCTTTTGTTGTTGCTCAGCTGATTGCCACTTTGATCGCAGTCTATGCAAACTGGAGCTTTGCAGCAATTGAAGGAATTGGTTGGGGTTGGGCTGGTGTCATATggctatataatataatattctataTCCCCCTTGATTTCGTTAAGTTCTTCATTCGATATGCTTTGAGTGGTAGGGCTTGGGATCTTGTCATTGAGCAAAGGATTGCATTCACAAGGCAAAAGGACTTTGGAAAGGAGCAACGGGAACTTCAATGGGCACATGCACAAAGAACATTACATGGATTGCAACCACCTGACACCAAGATGTTCACTGAGCGTACCCATTACACTGAACTGAATCAAATGGCTGAAGAAGCTAAAAGAAGAGCTGAAATTGCAAGGTTACGGGAATTGCACACACTAAAAGGTCATGTAGAATCAGTTGTGAGATTGAAGGGGCTCGACATAGACACAATTCAGCAAGCATACACAGTCTG 3011 0.441 MDNQSRVPQGNVKLPFYPDWFVVFVVVWLHSFLSSNSNLRERKLEKKMGDKPEVLDAVLKETVDLENIPLEEVFENLRCSREGLSSEAAEERLRIFGHNKLEEKKERKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLLINSTISFIEENNAGNAAAALMARLAPKAKVLRDGRWSEQDAAVLVPGDIVSVKLGDIIPADSRLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVDPDTVVLMAARASRTENQDAIDSAIVGMLADPKEARAGIREVHFLPFNPTDKRTALTYIDSDGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESPGGPWQFVGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVSTLEKTAHDDFRKLASAIYLQVSTISQALIFVTRSRGWSYVERPGFLLVAAFVVAQLIATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDFVKFFIRYALSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQPPDTKMFTERTHYTELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIDTIQQAYTV 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01269 1003 Pfam E1-E2 ATPase 179 357 - -
Bva06g01269 1003 Gene3D - 375 674 IPR023214 -
Bva06g01269 1003 SUPERFAMILY HAD-like 374 684 IPR036412 -
Bva06g01269 1003 Coils Coil 954 974 - -
Bva06g01269 1003 Gene3D - 390 537 IPR023299 GO:0000166
Bva06g01269 1003 SFLD C1.7: P-type atpase like 360 688 - -
Bva06g01269 1003 Gene3D - 952 1003 - -
Bva06g01269 1003 SMART Cation_ATPase_N_a_2 64 136 IPR004014 -
Bva06g01269 1003 PANTHER PLASMA MEMBRANE ATPASE 1 50 983 - -
Bva06g01269 1003 SUPERFAMILY Calcium ATPase, transmembrane domain M 64 900 IPR023298 -
Bva06g01269 1003 PRINTS P-type cation-transporting ATPase superfamily signature 228 242 - -
Bva06g01269 1003 PRINTS P-type cation-transporting ATPase superfamily signature 554 564 - -
Bva06g01269 1003 PRINTS P-type cation-transporting ATPase superfamily signature 660 672 - -
Bva06g01269 1003 PRINTS P-type cation-transporting ATPase superfamily signature 532 543 - -
Bva06g01269 1003 PRINTS P-type cation-transporting ATPase superfamily signature 378 392 - -
Bva06g01269 1003 PRINTS P-type cation-transporting ATPase superfamily signature 637 656 - -
Bva06g01269 1003 Gene3D - 181 265 - -
Bva06g01269 1003 SFLD p-type atpase 360 688 IPR044492 -
Bva06g01269 1003 PRINTS H+-transporting ATPase (proton pump) signature 609 625 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g01269 1003 PRINTS H+-transporting ATPase (proton pump) signature 494 512 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g01269 1003 PRINTS H+-transporting ATPase (proton pump) signature 637 653 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g01269 1003 PRINTS H+-transporting ATPase (proton pump) signature 813 834 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g01269 1003 PRINTS H+-transporting ATPase (proton pump) signature 668 693 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g01269 1003 Pfam Cation transporter/ATPase, N-terminus 67 130 IPR004014 -
Bva06g01269 1003 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 150 412 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g01269 1003 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 612 725 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g01269 1003 PANTHER CALCIUM-TRANSPORTING ATPASE 50 983 - -
Bva06g01269 1003 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 83 859 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bva06g01269 1003 SUPERFAMILY Calcium ATPase, transduction domain A 181 278 IPR008250 -
Bva06g01269 1003 ProSitePatterns E1-E2 ATPases phosphorylation site. 380 386 IPR018303 -
Bva06g01269 1003 CDD P-type_ATPase_H 83 894 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bva06g01269 1003 Pfam haloacid dehalogenase-like hydrolase 374 651 - -
Bva06g01269 1003 Gene3D - 143 868 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01269 Bva-Chr6 9680341 9687126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01269 48 1003 Primary Pumps ATPases AT5G62670 93.096 0.0 1803
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01269 K01535 - cpap:110819640 1768.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01269 06 9680341 9687126 Bva05g00438 05 2168183 2174225 ECH
Bva06g01269 06 9680341 9687126 Bva06g01269 06 9680341 9687126 ECH