Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01265 ATGGAAATGGCTACTGTAGCATCGATCTTCTTATTGATTTCTGCAACAGTTTTGTACCCTTCGTCTCTTGCTCTCACTCAGGATGGTCTCGCGTTGTTGGAGATCAAAAGCACTTTGAATGATACGAGGAACGTTCTTAGCAATTGGCAGGAGTCTGATGACTCTCCCTGTGCGTGGACTGGTATCGCTTGTCATCCGGGCAATGAACACGTTCGGTCAATAAATTTGCCTTTCATGCAACTGGGAGGGATTGTATCTCCCAGCATTGGTAAACTCAGTAGATTGCAGAGACTGGCACTTCATCAGAACAGCTTACGTGGAATTATTCCCAATGAAATTACCAATTGCACTGAGCTCAGAGCACTGTACTTGAGAGCCAATTATTTCCAATCTGGCATACCATCGGATATTGGCAATCTTTCATATTTGAATATACTGGACTTATCAAGCAACTTATTGAAGGGTGCTATACCTTCATCTATTGGCCGTCTCTCAAATTTGCGAGTTCTGAACTTGTCGACCAACTTCTTTTCTGGTGAAATCCCGGACATTGGAGTGCTAAGCACATTTGGAAAAGACTCGTTTATTGGCAATTCAGATCTTTGCGGCCGGCAAGTTCAGAAACCATGTCGGACCTCACTAGGTTTCCCTGTGGTGCTGCCCCATGCTGAAAGCGATGAAGCAGCAGTCCCTACTAAAAGATCATCACATTACATTAAGGGACTTCTGATTGGTGCAATATCCACGATGGGCATTGCACTTGTCATAGTCCTTTCACTCCTATGGATTTGTTTGCTATCGAAGAAGGAAAAAGCTGTCAGAAAATATGCAGAAGTCAAGAAGCAAGTCGATCCAGAAGCAAGCACAAAACTTATTACCTTCCATGGTGATCTGCCATACCCATCATCTGAGATCATAGAAAAGCTAGAGGCACTTGATGAAGAGGATGTAGTAGGATCAGGTGGATTTGGCACTGTTTATCGAATGGTCATGAATGATTGTGGAACATTTGCTGTTAAGCGGATTGATAGAGATCACGAAGGATCTGATAAGGCGTTTGAAAGGGAACTAGAGATTTTGGGTAGCATCAAGCacataaatttagttaatctGCGTGGCTACTGCAGGATCCCTACTTCAAAACTACTTATCTATGATTATTTAGCCATGGGCAGCTTAGATGATCTCTTGCATGAAAATAGCGAACAAGAATCATTAAATTGGGATGCTCGCCTAAAAATAGTCCTTGGTTCTGCCCGGGGTTTGGCATACTTGCACCATGACTGCAGCCCAAAAATTGTGCATCGAGACATAAAATCCAGCAATATCCTCCTTGATGAAAATTTAGAGCCTCGTGTGGCAGATTTTGGTCTTGCTAAGCTTTTGGTTGATGAAGAAGCTCACGTTACAACTGTGGTTGCTGGCACATTTGGCTACTTGGCACCAgAGTATCTACAAAGTGGAAGAGCAACAGTGAAATCAGATGTATATAGCTTTGGAGTTTTATTGCTAGAAATTGTGACTGGAAAGAGACCTACAGATCTTTCCTTTGTAAAGAGAGGCTTAAATGTTGTTGGTTGGATGAACACATTGCTTAAAGAGAATAGATTGGAAGACGTGGTAGACAAGAGATGCAGTGATGCAGATTTAGGAAGTGTTGAGGCTGTTCTTGAGTTGGCAGCAAGATGTACTGATGCAAACCCAGATGAGCGTCCATCAATGAACCAGGTGTTACAGTTGCTAGAACAAGAGGTCATGTCTCCTTGCCCAAGTGATTTTTACGAGACCCATTCAGATCACTGCTA 1805 0.4255 MEMATVASIFLLISATVLYPSSLALTQDGLALLEIKSTLNDTRNVLSNWQESDDSPCAWTGIACHPGNEHVRSINLPFMQLGGIVSPSIGKLSRLQRLALHQNSLRGIIPNEITNCTELRALYLRANYFQSGIPSDIGNLSYLNILDLSSNLLKGAIPSSIGRLSNLRVLNLSTNFFSGEIPDIGVLSTFGKDSFIGNSDLCGRQVQKPCRTSLGFPVVLPHAESDEAAVPTKRSSHYIKGLLIGAISTMGIALVIVLSLLWICLLSKKEKAVRKYAEVKKQVDPEASTKLITFHGDLPYPSSEIIEKLEALDEEDVVGSGGFGTVYRMVMNDCGTFAVKRIDRDHEGSDKAFERELEILGSIKHINLVNLRGYCRIPTSKLLIYDYLAMGSLDDLLHENSEQESLNWDARLKIVLGSARGLAYLHHDCSPKIVHRDIKSSNILLDENLEPRVADFGLAKLLVDEEAHVTTVVAGTFGYLAPEYLQSGRATVKSDVYSFGVLLLEIVTGKRPTDLSFVKRGLNVVGWMNTLLKENRLEDVVDKRCSDADLGSVEAVLELAARCTDANPDERPSMNQVLQLLEQEVMSPCPSDFYETHSDHC 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01265 601 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Bva06g01265 601 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 36 593 - -
Bva06g01265 601 SMART serkin_6 312 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01265 601 Gene3D Phosphorylase Kinase; domain 1 272 387 - -
Bva06g01265 601 Gene3D Transferase(Phosphotransferase) domain 1 388 590 - -
Bva06g01265 601 PANTHER REPEAT FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 36 593 - -
Bva06g01265 601 ProSitePatterns Protein kinases ATP-binding region signature. 318 340 IPR017441 GO:0005524
Bva06g01265 601 SUPERFAMILY Protein kinase-like (PK-like) 296 582 IPR011009 -
Bva06g01265 601 Pfam Protein kinase domain 314 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g01265 601 ProSitePatterns Serine/Threonine protein kinases active-site signature. 433 445 IPR008271 GO:0004672|GO:0006468
Bva06g01265 601 SUPERFAMILY L domain-like 25 184 - -
Bva06g01265 601 Gene3D Ribonuclease Inhibitor 25 212 IPR032675 -
Bva06g01265 601 ProSiteProfiles Protein kinase domain profile. 312 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01265 Bva-Chr6 9663562 9667939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01265 3 590 Receptor kinase-like Gene Family AT2G35620 51.443 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Bva06g01265 Pkinase 4.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01265 - - gmx:100797653 1016.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01265 06 9663562 9667939 Bva06g01265 06 9663562 9667939 ECH