Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01254 ATGTATGCAATTGGTGGTAGCAAAAATCCCACCATCATCAGCCAGGGTAACCGGTTTGTTGCTCCTGATAAGAGAGAATGCAaagagGTGACCAAGAGGGATTATGCAAGTCAAAGTGAGTGGAAGAATTGGAATTGGAGATCAGAGGGAGATTTATTGGCGAATGGAGCCTTCTTTGTTCAGTCTGGAAAAGAAGTTGCACTTCCCAAGAAGGAAATGACCGCAAGGCCTGCCTCAACTGTGGCCTCTCTCACTCGTTATGCAGGTGCTCTAAACTGCCTAGTCAATAAGCCATgttg 299 0.4482 MYAIGGSKNPTIISQGNRFVAPDKRECKEVTKRDYASQSEWKNWNWRSEGDLLANGAFFVQSGKEVALPKKEMTARPASTVASLTRYAGALNCLVNKPC 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01254 99 PRINTS Pollen allergen Amb family signature 2 21 IPR018082 -
Bva06g01254 99 PRINTS Pollen allergen Amb family signature 44 68 IPR018082 -
Bva06g01254 99 Gene3D - 1 92 IPR012334 -
Bva06g01254 99 PANTHER PECTATE LYASE 18-RELATED 1 99 IPR045032 GO:0030570
Bva06g01254 99 PANTHER PECTATE LYASE 1 99 - -
Bva06g01254 99 SUPERFAMILY Pectin lyase-like 1 99 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01254 Bva-Chr6 9632745 9633137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01254 1 99 Polysaccharide Lyase AT3G01270 54.808 1.67e-33 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01254 K01728 - gmx:100801864 152.14